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Select item 110727211.

LYST deficiency impairs autophagic lysosome reformation in neurons and alters lysosome number and size

Jenny Serra-Vinardell, Maxwell B. Sandler, Raffaella De Pace, Javier Manzella-Lapeira, Antony Cougnoux, Keyvan Keyvanfar, Wendy J. Introne, Joseph A. Brzostowski, Michael E. Ward, William A. Gahl, Prashant Sharma, May Christine V. Malicdan

Cell Mol Life Sci. 2023 Feb; 80(2): 53. Published online 2023 Jan 28. doi: 10.1007/s00018-023-04695-x

Correction in:: Cell Mol Life Sci. 2023 Mar; 80(3): 81.

PMCID:: PMC11072721

Abstract Article PDF–13M

Select item 108121202.

Lysosomal trafficking regulator restricts intracellular growth of Coxiella burnetii by inhibiting the expansion of Coxiella-containing vacuole and upregulating nos2 expression

Weiqiang Wan, Shan Zhang, Mingliang Zhao, Xuan OuYang, Yonghui Yu, Xiaolu Xiong, Ning Zhao, Jun Jiao

Front Cell Infect Microbiol. 2023; 13: 1336600. Published online 2024 Jan 11. doi: 10.3389/fcimb.2023.1336600

PMCID:: PMC10812120

Abstract Article PDF–7.1M

Select item 100729063.

Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity

Martin Golkowski, Andrea Lius, Tanmay Sapre, Ho-Tak Lau, Taylor Moreno, Dustin J. Maly, Shao-En Ong

Mol Cell. Author manuscript; available in PMC 2023 Apr 4.

Published in final edited form as: Mol Cell. 2023 Mar 2; 83(5): 803–818.e8. Published online 2023 Feb 2. doi: 10.1016/j.molcel.2023.01.015

PMCID:: PMC10072906

Abstract Article PDF–4.2M

Select item 92626144.

A dual-activity topoisomerase complex regulates mRNA translation and turnover

Shuaikun Su, Yutong Xue, Alexei Sharov, Yongqing Zhang, Seung Kyu Lee, Jennifer L Martindale, Wen Li, Wai Lim Ku, Keji Zhao, Supriyo De, Weiping Shen, Payel Sen, Myriam Gorospe, Dongyi Xu, Weidong Wang

Nucleic Acids Res. 2022 Jul 8; 50(12): 7013–7033. Published online 2022 Jun 24. doi: 10.1093/nar/gkac538

PMCID:: PMC9262614

Abstract Article PDF–3.6M

Select item 91197365.

OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization

Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti

Science. Author manuscript; available in PMC 2022 Sep 11.

Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983

PMCID:: PMC9119736

Abstract Article PDF–3.3M

Select item 90375546.

C5orf51 is a component of the MON1-CCZ1 complex and controls RAB7A localization and stability during mitophagy

Bing-Ru Yan, Taoyingnan Li, Etienne Coyaud, Estelle M. N. Laurent, Jonathan St-Germain, Yuhuan Zhou, Peter K. Kim, Brian Raught, John H. Brumell

Autophagy. 2022; 18(4): 829–840. Published online 2021 Aug 25. doi: 10.1080/15548627.2021.1960116

PMCID:: PMC9037554

Abstract Article PDF–4.1M

Select item 87489587.

EZH2 depletion potentiates MYC degradation inhibiting neuroblastoma and small cell carcinoma tumor formation

Liyuan Wang, Chan Chen, Zemin Song, Honghong Wang, Minghui Ye, Donghai Wang, Wenqian Kang, Hudan Liu, Guoliang Qing

Nat Commun. 2022; 13: 12. Published online 2022 Jan 10. doi: 10.1038/s41467-021-27609-6

PMCID:: PMC8748958

Abstract Article PDF–3.0M

Select item 74273278.

Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases

Marija Buljan, Rodolfo Ciuffa, Audrey van Drogen, Anton Vichalkovski, Martin Mehnert, George Rosenberger, Sohyon Lee, Markku Varjosalo, Lucia Espona Pernas, Vincent Spegg, Berend Snijder, Ruedi Aebersold, Matthias Gstaiger

Mol Cell. 2020 Aug 6; 79(3): 504–520.e9. doi: 10.1016/j.molcel.2020.07.001

PMCID:: PMC7427327

Abstract Article

Select item 70831459.

DNA methylation signatures and coagulation factors in the peripheral blood leucocytes of epithelial ovarian cancer

Lian Li, Hong Zheng, Yubei Huang, Caiyun Huang, Shuang Zhang, Jing Tian, Pei Li, Anil K Sood, Wei Zhang, Kexin Chen

Carcinogenesis. 2017 Aug; 38(8): 797–805. Published online 2017 Jun 16. doi: 10.1093/carcin/bgx057

PMCID:: PMC7083145

Abstract Article PDF–13M

Select item 694391610.

Identification of a compound heterozygote in LYST gene: a case report on Chediak-Higashi syndrome

Yinsen Song, Zhengping Dong, Shuying Luo, Junmei Yang, Yuebing Lu, Bo Gao, Tianli Fan

BMC Med Genet. 2020; 21: 4. Published online 2020 Jan 6. doi: 10.1186/s12881-019-0922-8

PMCID:: PMC6943916

Abstract Article PDF–897K

Select item 677813711.

The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis

Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca, Liviu Copoiu, Anton J. Enright, Giuliano Callaini, Maria Giovanna Riparbelli, Lu Yu, Jyoti S. Choudhary, Enrico Ferrero, Sally Wheatley, Max E. Douglas, Masanori Mishima, Pier Paolo D’Avino

Nat Commun. 2019; 10: 4513. Published online 2019 Oct 4. doi: 10.1038/s41467-019-12507-9

PMCID:: PMC6778137

Abstract Article PDF–7.8M

Select item 677305012.

Neurobeachin: A Protein Kinase A-Anchoring,beige/Chediak-Higashi Protein Homolog Implicated in Neuronal Membrane Traffic

Xiaolu Wang, Friedrich W. Herberg, Michael M. Laue, Christiane Wüllner, Bin Hu, Elisabeth Petrasch-Parwez, Manfred W. Kilimann

J Neurosci. 2000 Dec 1; 20(23): 8551–8565. doi: 10.1523/JNEUROSCI.20-23-08551.2000

PMCID:: PMC6773050

Abstract Article PDF–1.5M

Select item 585677513.

SUMO targets the APC/C to regulate transition from metaphase to anaphase

Karolin Eifler, Sabine A. G. Cuijpers, Edwin Willemstein, Jonne A. Raaijmakers, Dris El Atmioui, Huib Ovaa, René H. Medema, Alfred C. O. Vertegaal

Nat Commun. 2018; 9: 1119. Published online 2018 Mar 16. doi: 10.1038/s41467-018-03486-4

PMCID:: PMC5856775

Abstract Article PDF–1.8M

Select item 582692614.

VIRMA mediates preferential m⁶A mRNA methylation in 3′UTR and near stop codon and associates with alternative polyadenylation

Yanan Yue, Jun Liu, Xiaolong Cui, Jie Cao, Guanzheng Luo, Zezhou Zhang, Tao Cheng, Minsong Gao, Xiao Shu, Honghui Ma, Fengqin Wang, Xinxia Wang, Bin Shen, Yizhen Wang, Xinhua Feng, Chuan He, Jianzhao Liu

Cell Discov. 2018; 4: 10. Published online 2018 Feb 27. doi: 10.1038/s41421-018-0019-0

PMCID:: PMC5826926

Abstract Article PDF–2.3M

Select item 563884615.

The driver landscape of sporadic chordoma

Patrick S. Tarpey, Sam Behjati, Matthew D. Young, Inigo Martincorena, Ludmil B. Alexandrov, Sarah J. Farndon, Charlotte Guzzo, Claire Hardy, Calli Latimer, Adam P. Butler, Jon W. Teague, Adam Shlien, P. Andrew Futreal, Sohrab Shah, Ali Bashashati, Farzad Jamshidi, Torsten O. Nielsen, David Huntsman, Daniel Baumhoer, Sebastian Brandner, Jay Wunder, Brendan Dickson, Patricia Cogswell, Josh Sommer, Joanna J. Phillips, M. Fernanda Amary, Roberto Tirabosco, Nischalan Pillay, Stephen Yip, Michael R. Stratton, Adrienne M. Flanagan, Peter J. Campbell

Nat Commun. 2017; 8: 890. Published online 2017 Oct 12. doi: 10.1038/s41467-017-01026-0

PMCID:: PMC5638846

Abstract Article PDF–938K

Select item 482681116.

Chediak-Higashi syndrome: LYST domains regulate exocytosis of lytic granules, but not cytokine secretion by NK cells

Aleksandra Gil-Krzewska, Stephanie M. Wood, Yousuke Murakami, Victoria Nguyen, Samuel Cern Cher Chiang, Andrew R. Cullinane, Peruzzi Giovanna, William A. Gahl, John E. Coligan, Wendy J. Introne, Yenan T. Bryceson, Konrad Krzewski

J Allergy Clin Immunol. Author manuscript; available in PMC 2017 Apr 1.

Published in final edited form as: J Allergy Clin Immunol. 2016 Apr; 137(4): 1165–1177. Published online 2015 Oct 21. doi: 10.1016/j.jaci.2015.08.039

PMCID:: PMC4826811

Abstract Article PDF–1.6M

Select item 317805917.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 289357818.

Identification of the homologous beige and Chediak–Higashi syndrome genes

Maria D. F. S. Barbosa, Quan A. Nguyen, Velizar T. Tchernev, Jennifer A. Ashley, John C. Detter, Susan M. Blaydes, Stephen J. Brandt, Dipti Chotai, Charles Hodgman, Roberto C. E. Solari, Michael Lovett, Stephen F. Kingsmore

Nature. Author manuscript; available in PMC 2010 Jun 29.

Published in final edited form as: Nature. 1996 Jul 18; 382(6588): 262–265. doi: 10.1038/382262a0

Correction in:: volume 385 on page 97

PMCID:: PMC2893578

Abstract Article PDF–1.4M

Select item 287107019.

Identification of mutations in two major mRNA isoforms of the Chediak–Higashi syndrome gene in human and mouse

Maria D. F. S. Barbosa, Franck J. Barrat, Velizar T. Tchernev, Quan A. Nguyen, Vishnu S. Mishra, Steven D. Colman, Elodie Pastural, Rémi Dufourcq-Lagelouse, Alain Fischer, Randall F. Holcombe, Margaret R. Wallace, Stephen J. Brandt, Geneviève de Saint Basile, Stephen F. Kingsmore

Hum Mol Genet. Author manuscript; available in PMC 2010 May 14.

Published in final edited form as: Hum Mol Genet. 1997 Jul; 6(7): 1091–1098. doi: 10.1093/hmg/6.7.1091

PMCID:: PMC2871070

Abstract Article PDF–1.2M

Select item 286550920.

Digital Quantification of Human Eye Color Highlights Genetic Association of Three New Loci

Fan Liu, Andreas Wollstein, Pirro G. Hysi, Georgina A. Ankra-Badu, Timothy D. Spector, Daniel Park, Gu Zhu, Mats Larsson, David L. Duffy, Grant W. Montgomery, David A. Mackey, Susan Walsh, Oscar Lao, Albert Hofman, Fernando Rivadeneira, Johannes R. Vingerling, André G. Uitterlinden, Nicholas G. Martin, Christopher J. Hammond, Manfred Kayser

PLoS Genet. 2010 May; 6(5): e1000934. Published online 2010 May 6. doi: 10.1371/journal.pgen.1000934

PMCID:: PMC2865509

Abstract Article PDF–2.0M

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PMC Links for GEO Profiles (Select 55726942) (30)
PMC
ND4L [Microtus cabrerae]
ND4L [Microtus cabrerae]
Gene ID:67272911

Gene
PREDICTED: Homo sapiens chromosome 5 open reading frame 46 (C5orf46), transcript...
PREDICTED: Homo sapiens chromosome 5 open reading frame 46 (C5orf46), transcript variant X2, mRNA
gi|2217355785|ref|XM_047417169.1|

Nucleotide
cytochrome b (mitochondrion) [Microtus chrotorrhinus]
cytochrome b (mitochondrion) [Microtus chrotorrhinus]
gi|1989769085|gb|QRW36214.1|

Protein
NADH dehydrogenase subunit 4L (mitochondrion) [Microtus thomasi]
NADH dehydrogenase subunit 4L (mitochondrion) [Microtus thomasi]
gi|1989769095|gb|QRW36223.1|

Protein

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