PMC Links for GEO Profiles (Select 6121210) - PMC

Neha Hafeez, Anna Kirillova, Yunshan Yue, Rashmi J. Rao, Neil J. Kelly, Wadih El Khoury, Yassmin Al Aaraj, Yi‐Yin Tai, Adam Handen, Ying Tang, Danli Jiang, Ting Wu, Yingze Zhang, Dennis McNamara, Tatiana V. Kudryashova, Elena A. Goncharova, Dmitry Goncharov, Thomas Bertero, Mehdi Nouraie, Gang Li, Wei Sun, Stephen Y. Chan

J Am Heart Assoc. 2023 Apr 4; 12(7): e027894. Published online 2023 Mar 28. doi: 10.1161/JAHA.122.027894

PMCID:: PMC10122886

Abstract Article PDF–14M

Select item 99186594.

Identification of HLA-DPA1*01:03:01:57 and HLA-DPA1*02:01:01:29 from a case-control study of Atopic Dermatitis

Georgios Damianos, Jamie L. Duke, Ioanna Pagkrati, David J. Margolis, Dimitri S. Monos

HLA. Author manuscript; available in PMC 2024 Mar 1.

Published in final edited form as: HLA. 2023 Mar; 101(3): 307–309. Published online 2022 Nov 30. doi: 10.1111/tan.14900

PMCID:: PMC9918659

Abstract Article PDF–93K

Select item 95394255.

Association of HLA-DPA1 polymorphism with prolonged mechanical ventilation in patients undergoing liver transplantation

Eun Jung Kim, Min-Soo Kim, Myoung Soo Kim, Junhyun Nam, Seung Ho Choi

Korean J Anesthesiol. 2022 Oct; 75(5): 397–406. Published online 2022 May 3. doi: 10.4097/kja.22014

PMCID:: PMC9539425

Abstract Article PDF–488K

Select item 84164386.

Association of HLA-DPA1, HLA-DPB1, and HLA-DQB1 Alleles With the Long-Term and Booster Immune Responses of Young Adults Vaccinated Against the Hepatitis B Virus as Neonates

Wen-Chang Wang, Yu-Shiang Lin, Yin-Fan Chang, Chih-Ching Yeh, Chien-Tien Su, Jin-Shang Wu, Fu-Hsiung Su

Front Immunol. 2021; 12: 710414. Published online 2021 Aug 18. doi: 10.3389/fimmu.2021.710414

PMCID:: PMC8416438

Abstract Article PDF–1.1M

Select item 81650307.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 75132958.

HLA-DPA1 gene is a potential predictor with prognostic values in multiple myeloma

Jie Yang, Fei Wang, Baoan Chen

BMC Cancer. 2020; 20: 915. Published online 2020 Sep 24. doi: 10.1186/s12885-020-07393-0

PMCID:: PMC7513295

Abstract Article PDF–3.0M

Select item 71699839.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 697823810.

Relationship between HLA‐DPA1 genetic polymorphism and anembryonic pregnancy

Zhendong Wang, Xiaolin Lu, Xiuying Yao, Xinli Liu, Linlin Zhao, Shaoyan Chang, Ting Zhang, Bo Niu, Li Wang

Mol Genet Genomic Med. 2020 Jan; 8(1): e1046. Published online 2019 Nov 30. doi: 10.1002/mgg3.1046

PMCID:: PMC6978238

Abstract Article PDF–502K

Select item 674146911.

HIV-1 Gag-Virus-Like Particles Induce Natural Killer Cell Immune Responses via Activation and Maturation of Dendritic Cells

Myint Oo Chang, Tomoyuki Suzuki, Hitoshi Suzuki, Hiroshi Takaku

J Innate Immun. 2012 Feb; 4(2): 187–200. Published online 2011 Jul 22. doi: 10.1159/000329226

PMCID:: PMC6741469

Abstract Article PDF–990K

Select item 639151612.

Genetic determinants of risk in pulmonary arterial hypertension: international genome-wide association studies and meta-analysis

Christopher J Rhodes, Ken Batai, Marta Bleda, Matthias Haimel, Laura Southgate, Marine Germain, Michael W Pauciulo, Charaka Hadinnapola, Jurjan Aman, Barbara Girerd, Amit Arora, Jo Knight, Ken B Hanscombe, Jason H Karnes, Marika Kaakinen, Henning Gall, Anna Ulrich, Lars Harbaum, Inês Cebola, Jorge Ferrer, Katie Lutz, Emilia M Swietlik, Ferhaan Ahmad, Philippe Amouyel, Stephen L Archer, Rahul Argula, Eric D Austin, David Badesch, Sahil Bakshi, Christopher Barnett, Raymond Benza, Nitin Bhatt, Harm J Bogaard, Charles D Burger, Murali Chakinala, Colin Church, John G Coghlan, Robin Condliffe, Paul A Corris, Cesare Danesino, Stéphanie Debette, C Gregory Elliott, Jean Elwing, Melanie Eyries, Terry Fortin, Andre Franke, Robert P Frantz, Adaani Frost, Joe G N Garcia, Stefano Ghio, Hossein-Ardeschir Ghofrani, J Simon R Gibbs, John Harley, Hua He, Nicholas S Hill, Russel Hirsch, Arjan C Houweling, Luke S Howard, Dunbar Ivy, David G Kiely, James Klinger, Gabor Kovacs, Tim Lahm, Matthias Laudes, Rajiv D Machado, Robert V MacKenzie Ross, Keith Marsolo, Lisa J Martin, Shahin Moledina, David Montani, Steven D Nathan, Michael Newnham, Andrea Olschewski, Horst Olschewski, Ronald J Oudiz, Willem H Ouwehand, Andrew J Peacock, Joanna Pepke-Zaba, Zia Rehman, Ivan Robbins, Dan M Roden, Erika B Rosenzweig, Ghulam Saydain, Laura Scelsi, Robert Schilz, Werner Seeger, Christian M Shaffer, Robert W Simms, Marc Simon, Olivier Sitbon, Jay Suntharalingam, Haiyang Tang, Alexander Y Tchourbanov, Thenappan Thenappan, Fernando Torres, Mark R Toshner, Carmen M Treacy, Anton Vonk Noordegraaf, Quinten Waisfisz, Anna K Walsworth, Robert E Walter, John Wharton, R James White, Jeffrey Wilt, Stephen J Wort, Delphine Yung, Allan Lawrie, Marc Humbert, Florent Soubrier, David-Alexandre Trégouët, Inga Prokopenko, Richard Kittles, Stefan Gräf, William C Nichols, Richard C Trembath, Ankit A Desai, Nicholas W Morrell, Martin R Wilkins, UK NIHR BioResource Rare Diseases Consortium, UK PAH Cohort Study Consortium, US PAH Biobank Consortium

Lancet Respir Med. 2019 Mar; 7(3): 227–238. doi: 10.1016/S2213-2600(18)30409-0

PMCID:: PMC6391516

Abstract Article

Select item 620919413.

Amino acid signatures in the HLA class II peptide-binding region associated with protection/susceptibility to the severe West Nile Virus disease

Constantina A. Sarri, Georgios E. Papadopoulos, Anna Papa, Athanasios Tsakris, Danai Pervanidou, Agoritsa Baka, Constantina Politis, Charalambos Billinis, Christos Hadjichristodoulou, Zissis Mamuris, MALWEST project

PLoS One. 2018; 13(10): e0205557. Published online 2018 Oct 31. doi: 10.1371/journal.pone.0205557

PMCID:: PMC6209194

Abstract Article PDF–2.4M

Select item 553161114.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 502590115.

Genetic risk factors for sclerotic graft-versus-host disease

Yoshihiro Inamoto, Paul J. Martin, Mary E. D. Flowers, Stephanie J. Lee, Paul A. Carpenter, Edus H. Warren, Daniel E. Geraghty, Ni Lee, Michael J. Boeckh, Barry E. Storer, David M. Levine, Wenhong Fan, Lue-Ping Zhao, John A. Hansen

Blood. 2016 Sep 15; 128(11): 1516–1524. Prepublished online 2016 Jun 16. doi: 10.1182/blood-2016-05-715342

PMCID:: PMC5025901

Abstract Article

Select item 461721116.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 410012417.

Genetic Variants in Human Leukocyte Antigen-DP Influence Both Hepatitis C Virus Persistence and Hepatitis C Virus F Protein Generation in the Chinese Han Population

Xiaodong Xu, Ming Yue, Longfeng Jiang, Xiaozhao Deng, Yongxiang Zhang, Yun Zhang, Danyan Zhu, Wen Xiao, Zhenxian Zhou, Wenjuan Yao, Jing Kong, Xiaojie Yu, Juan Wei

Int J Mol Sci. 2014 Jun; 15(6): 9826–9843. Published online 2014 Jun 3. doi: 10.3390/ijms15069826

PMCID:: PMC4100124

Abstract Article PDF–246K

Select item 403304318.

The activity of Nef on HIV-1 infectivity

Stéphane Basmaciogullari, Massimo Pizzato

Front Microbiol. 2014; 5: 232. Published online 2014 May 20. doi: 10.3389/fmicb.2014.00232

PMCID:: PMC4033043

Abstract Article PDF–1.2M

Select item 390044619.

Genetic Association of Human Leukocyte Antigens with Chronicity or Resolution of Hepatitis B Infection in Thai Population

Nawarat Posuwan, Sunchai Payungporn, Pisit Tangkijvanich, Shintaro Ogawa, Shuko Murakami, Sayuki Iijima, Kentaro Matsuura, Noboru Shinkai, Tsunamasa Watanabe, Yong Poovorawan, Yasuhito Tanaka

PLoS One. 2014; 9(1): e86007. Published online 2014 Jan 23. doi: 10.1371/journal.pone.0086007

PMCID:: PMC3900446

Abstract Article PDF–156K

Select item 380789220.

HLA-DP Polymorphisms Affect the Outcomes of Chronic Hepatitis B Virus Infections, Possibly through Interacting with Viral Mutations

Qi Zhang, Jianhua Yin, Yuwei Zhang, Yang Deng, Xiaowei Ji, Yan Du, Rui Pu, Yifang Han, Jun Zhao, Xue Han, Hongwei Zhang, Guangwen Cao

J Virol. 2013 Nov; 87(22): 12176–12186. doi: 10.1128/JVI.02073-13

PMCID:: PMC3807892

Abstract Article PDF–207K

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