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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105517003.

Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability

Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai

Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108

PMCID:: PMC10551700

Abstract Article PDF–3.7M

Select item 104974064.

PCNA recruits cohesin loader Scc2 to ensure sister chromatid cohesion

Ivan Psakhye, Ryotaro Kawasumi, Takuya Abe, Kouji Hirota, Dana Branzei

Nat Struct Mol Biol. 2023; 30(9): 1286–1294. Published online 2023 Aug 17. doi: 10.1038/s41594-023-01064-x

PMCID:: PMC10497406

Abstract Article PDF–9.2M

Select item 102478595.

Replisome-cohesin interactions provided by the Tof1-Csm3 and Mrc1 cohesion establishment factors

Sudikchya Shrestha, Masashi Minamino, Zhuo A. Chen, Céline Bouchoux, Juri Rappsilber, Frank Uhlmann

Chromosoma. 2023; 132(2): 117–135. Published online 2023 May 11. doi: 10.1007/s00412-023-00797-4

PMCID:: PMC10247859

Abstract Article PDF–2.3M

Select item 98166446.

Suppression of chromosome instability by targeting a DNA helicase in budding yeast

Molly R. Gordon, Jin Zhu, Gordon Sun, Rong Li

Mol Biol Cell. 2023 Jan 1; 34(1): ar3. Published online 2022 Dec 15. doi: 10.1091/mbc.E22-09-0395

PMCID:: PMC9816644

Abstract Article PDF–3.9M

Select item 96309867.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 93392938.

Complex mutation profiles in mismatch repair and ribonucleotide reductase mutants reveal novel repair substrate specificity of MutS homolog (MSH) complexes

Natalie A Lamb, Jonathan E Bard, Raphael Loll-Krippleber, Grant W Brown, Jennifer A Surtees

Genetics. 2022 Aug; 221(4): iyac092. Published online 2022 Jun 10. doi: 10.1093/genetics/iyac092

PMCID:: PMC9339293

Abstract Article PDF–7.9M

Select item 92098119.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 877559110.

Systematic Screening of Penetratin’s Protein Targets by Yeast Proteome Microarrays

Pramod Shah, Chien-Sheng Chen

Int J Mol Sci. 2022 Jan; 23(2): 712. Published online 2022 Jan 10. doi: 10.3390/ijms23020712

PMCID:: PMC8775591

Abstract Article PDF–5.0M

Select item 838702311.

Rad53 checkpoint kinase regulation of DNA replication fork rate via Mrc1 phosphorylation

Allison W McClure, John FX Diffley

eLife. 2021; 10: e69726. Published online 2021 Aug 13. doi: 10.7554/eLife.69726

PMCID:: PMC8387023

Abstract Article PDF–4.9M

Select item 819177512.

FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation

He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng, Qing Li

Nucleic Acids Res. 2021 Jun 4; 49(10): 5502–5519. Published online 2021 May 8. doi: 10.1093/nar/gkab312

PMCID:: PMC8191775

Abstract Article PDF–3.0M

Select item 771875113.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 770804114.

Separable functions of Tof1/Timeless in intra-S-checkpoint signalling, replisome stability and DNA topological stress

Rose Westhorpe, Andrea Keszthelyi, Nicola E Minchell, David Jones, Jonathan Baxter

Nucleic Acids Res. 2020 Dec 2; 48(21): 12169–12187. Published online 2020 Nov 9. doi: 10.1093/nar/gkaa963

PMCID:: PMC7708041

Abstract Article PDF–2.0M

Select item 732543515.

A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae

Su Ming Sun, Amandine Batté, Mireille Elmer, Sophie C. van der Horst, Tibor van Welsem, Gordon Bean, Trey Ideker, Fred van Leeuwen, Haico van Attikum

J Cell Sci. 2020 May 15; 133(10): jcs237628. Published online 2020 May 22. doi: 10.1242/jcs.237628

PMCID:: PMC7325435

Abstract Article

Select item 728280916.

Cohesion is established during DNA replication utilising chromosome associated cohesin rings as well as those loaded de novo onto nascent DNAs

Madhusudhan Srinivasan, Marco Fumasoni, Naomi J Petela, Andrew Murray, Kim A Nasmyth

eLife. 2020; 9: e56611. Published online 2020 Jun 9. doi: 10.7554/eLife.56611

PMCID:: PMC7282809

Abstract Article PDF–4.9M

Select item 726172317.

Yeast Sphingolipid Phospholipase Gene ISC1 Regulates the Spindle Checkpoint by a CDC55-Dependent Mechanism

Nabil Matmati, Bachar H. Hassan, Jihui Ren, Ashraf A. Shamssedine, Eunmi Jeong, Baasil Shariff, Justin Snider, Steven V. Rødkær, Guocai Chen, Bidyut K. Mohanty, W. Jim Zheng, Lina M. Obeid, Martin Røssel-Larsen, Nils J. Færgeman, Yusuf A. Hannun

Mol Cell Biol. 2020 Jun; 40(12): e00340-19. Prepublished online 2020 Mar 23. Published online 2020 May 28. doi: 10.1128/MCB.00340-19