PMC Links for GEO Profiles (Select 6195279) - PMC

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 88014114.

Transcriptional repressor Gal80 recruits corepressor complex Cyc8–Tup1 to structural genes of the Saccharomyces cerevisiae GAL regulon

Julia Lettow, Rasha Aref, Hans-Joachim Schüller

Curr Genet. 2022; 68(1): 115–124. Published online 2021 Oct 7. doi: 10.1007/s00294-021-01215-x

PMCID:: PMC8801411

Abstract Article PDF–1.2M

Select item 83733805.

Variation in the modality of a yeast signaling pathway is mediated by a single regulator

Julius Palme, Jue Wang, Michael Springer

eLife. 2021; 10: e69974. Published online 2021 Aug 9. doi: 10.7554/eLife.69974

PMCID:: PMC8373380

Abstract Article PDF–2.9M

Select item 81735396.

Decoupling transcription factor expression and activity enables dimmer switch gene regulation

C. Ricci-Tam, I. Ben-Zion, J. Wang, J. Palme, A. Li, Y. Savir, M. Springer

Science. Author manuscript; available in PMC 2021 Jun 3.

Published in final edited form as: Science. 2021 Apr 16; 372(6539): 292–295. doi: 10.1126/science.aba7582

PMCID:: PMC8173539

Abstract Article PDF–914K

Select item 80675467.

A Bit Stickier, a Bit Slower, a Lot Stiffer: Specific vs. Nonspecific Binding of Gal4 to DNA

Thomas Carzaniga, Giuliano Zanchetta, Elisa Frezza, Luca Casiraghi, Luka Vanjur, Giovanni Nava, Giovanni Tagliabue, Giorgio Dieci, Marco Buscaglia, Tommaso Bellini

Int J Mol Sci. 2021 Apr; 22(8): 3813. Published online 2021 Apr 7. doi: 10.3390/ijms22083813

PMCID:: PMC8067546

Abstract Article PDF–3.3M

Select item 80442098.

Mediator subunit Med15 dictates the conserved “fuzzy” binding mechanism of yeast transcription activators Gal4 and Gcn4

Lisa M. Tuttle, Derek Pacheco, Linda Warfield, Damien B. Wilburn, Steven Hahn, Rachel E. Klevit

Nat Commun. 2021; 12: 2220. Published online 2021 Apr 13. doi: 10.1038/s41467-021-22441-4

PMCID:: PMC8044209

Abstract Article PDF–2.2M

Select item 79799309.

Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation

Ruifang Guan, Tengfei Lian, Bing-Rui Zhou, Emily He, Carl Wu, Martin Singleton, Yawen Bai

Nat Commun. 2021; 12: 1763. Published online 2021 Mar 19. doi: 10.1038/s41467-021-21985-9

PMCID:: PMC7979930

Abstract Article PDF–2.2M

Select item 778602910.

Mechanisms of stimulation of SAGA-mediated nucleosome acetylation by a transcriptional activator

Sannie J. Culbertson, Michael A. Shogren-Knaak

Biochem Biophys Rep. 2021 Mar; 25: 100884. Published online 2020 Dec 29. doi: 10.1016/j.bbrep.2020.100884

PMCID:: PMC7786029

Abstract Article PDF–1.3M

Select item 776875511.

Dynamics of RNA polymerase II and elongation factor Spt4/5 recruitment during activator-dependent transcription

Grace A. Rosen, Inwha Baek, Larry J. Friedman, Yoo Jin Joo, Stephen Buratowski, Jeff Gelles

Proc Natl Acad Sci U S A. 2020 Dec 22; 117(51): 32348–32357. Published online 2020 Dec 8. doi: 10.1073/pnas.2011224117

PMCID:: PMC7768755

Abstract Article PDF–1.3M

Select item 759570212.

Cells with loss-of-heterozygosity after exposure to ionizing radiation in Drosophila are culled by p53-dependent and p53-independent mechanisms

Jeremy Brown, Inle Bush, Justine Bozon, Tin Tin Su

PLoS Genet. 2020 Oct; 16(10): e1009056. Published online 2020 Oct 19. doi: 10.1371/journal.pgen.1009056

PMCID:: PMC7595702

Abstract Article PDF–3.7M

Select item 755675313.

A double role of the Gal80 N terminus in activation of transcription by Gal4p

Annekathrin Reinhardt-Tews, Rościsław Krutyhołowa, Christian Günzel, Constance Roehl, Sebastian Glatt, Karin D Breunig

Life Sci Alliance. 2020 Dec; 3(12): e202000665. Published online 2020 Oct 9. doi: 10.26508/lsa.202000665

PMCID:: PMC7556753

Abstract Article PDF–2.5M

Select item 666386014.

High-resolution protein–protein interaction mapping using all-versus-all sequencing (AVA-Seq)

Simeon S. Andrews, Stephanie Schaefer-Ramadan, Nayra M. Al-Thani, Ikhlak Ahmed, Yasmin A. Mohamoud, Joel A. Malek

J Biol Chem. 2019 Jul 26; 294(30): 11549–11558. Published online 2019 Jun 10. doi: 10.1074/jbc.RA119.008792

PMCID:: PMC6663860

Abstract Article PDF–1.3M

Select item 657617415.

Live‐cell imaging reveals the interplay between transcription factors, nucleosomes, and bursting

Benjamin T Donovan, Anh Huynh, David A Ball, Heta P Patel, Michael G Poirier, Daniel R Larson, Matthew L Ferguson, Tineke L Lenstra

EMBO J. 2019 Jun 17; 38(12): e100809. Published online 2019 May 17. doi: 10.15252/embj.2018100809

PMCID:: PMC6576174

Abstract Article PDF–2.1M

Select item 629136616.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 615888617.

Multi-component gene network design as a survival strategy in diverse environments

Xinyue Luo, Ruijie Song, Murat Acar

BMC Syst Biol. 2018; 12: 85. Published online 2018 Sep 26. doi: 10.1186/s12918-018-0609-3

PMCID:: PMC6158886

Abstract Article PDF–2.0M

Select item 611694918.

A Genome-Wide Screen Reveals a Role for the HIR Histone Chaperone Complex in Preventing Mislocalization of Budding Yeast CENP-A

Sultan Ciftci-Yilmaz, Wei-Chun Au, Prashant K. Mishra, Jessica R. Eisenstatt, Joy Chang, Anthony R. Dawson, Iris Zhu, Mahfuzur Rahman, Sven Bilke, Michael Costanzo, Anastasia Baryshnikova, Chad L. Myers, Paul S. Meltzer, David Landsman, Richard E. Baker, Charles Boone, Munira A. Basrai

Genetics. 2018 Sep; 210(1): 203–218. Published online 2018 Jul 16. doi: 10.1534/genetics.118.301305