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Select item 83132391.

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Francesco Bedogni, Robert F. Hevner

Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034

PMCID:: PMC8313239

Abstract Article PDF–1.6M

Select item 74862662.

Sequential CRISPR-based screens identify LITAF and CDIP1 as the Bacillus cereus hemolysin BL toxin host receptors

Jie Liu, Zehua Zuo, Inka Sastalla, Chengyu Liu, Ji Yong Jang, Yusuke Sekine, Yuesheng Li, Mehdi Pirooznia, Stephen H. Leppla, Toren Finkel, Shihui Liu

Cell Host Microbe. Author manuscript; available in PMC 2021 Sep 9.

Published in final edited form as: Cell Host Microbe. 2020 Sep 9; 28(3): 402–410.e5. Published online 2020 Jun 15. doi: 10.1016/j.chom.2020.05.012

PMCID:: PMC7486266

Abstract Article PDF–1.8M

Select item 60232233.

SIMPLE binds specifically to PI4P through SIMPLE-like domain and participates in protein trafficking in the trans-Golgi network and/or recycling endosomes

Yasuhiro Moriwaki, Yuho Ohno, Tomohiro Ishii, Yuki Takamura, Yuko Kita, Kazuhiko Watabe, Kazunori Sango, Shoutaro Tsuji, Hidemi Misawa

PLoS One. 2018; 13(6): e0199829. Published online 2018 Jun 28. doi: 10.1371/journal.pone.0199829

Expression of Concern in:: PLoS One. 2023; 18(1): e0280119.

PMCID:: PMC6023223

Abstract Article PDF–6.8M

Select item 57100024.

Tcf4 Regulates Synaptic Plasticity, DNA Methylation, and Memory Function

Andrew J. Kennedy, Elizabeth J. Rahn, Brynna S. Paulukaitis, Katherine E. Savell, Holly B. Kordasiewicz, Jing Wang, John W. Lewis, Jessica Posey, Sarah K. Strange, Mikael C. Guzman-Karlsson, Scott E. Phillips, Kyle Decker, S. Timothy Motley, Eric E. Swayze, David J. Ecker, Todd P. Michael, Jeremy J. Day, J. David Sweatt

Cell Rep. Author manuscript; available in PMC 2017 Dec 1.

Published in final edited form as: Cell Rep. 2016 Sep 6; 16(10): 2666–2685. Published online 2016 Aug 25. doi: 10.1016/j.celrep.2016.08.004

PMCID:: PMC5710002

Abstract Article PDF–1.4M

Select item 47471655.

LPS-induced TNF-α factor mediates pro-inflammatory and pro-fibrogenic pattern in non-alcoholic fatty liver disease

Sara Ceccarelli, Nadia Panera, Marco Mina, Daniela Gnani, Cristiano De Stefanis, Annalisa Crudele, Chiara Rychlicki, Stefania Petrini, Giovannella Bruscalupi, Laura Agostinelli, Laura Stronati, Salvatore Cucchiara, Giovanni Musso, Cesare Furlanello, Gianluca Svegliati-Baroni, Valerio Nobili, Anna Alisi

Oncotarget. 2015 Dec 8; 6(39): 41434–41452. Published online 2015 Oct 8. doi: 10.18632/oncotarget.5163

PMCID:: PMC4747165

Abstract Article PDF–7.6M

Select item 44759216.

Dysregulated Inflammatory Signaling upon Charcot-Marie-Tooth Type 1C Mutation of SIMPLE Protein

Wenjing Li, Hong Zhu, Xuelian Zhao, Deborah Brancho, Yuanxin Liang, Yiyu Zou, Craig Bennett, Chi-Wing Chow

Mol Cell Biol. 2015 Jul; 35(14): 2464–2478. Prepublished online 2015 May 11. Published online 2015 Jun 19. doi: 10.1128/MCB.00300-15

PMCID:: PMC4475921

Abstract Article PDF–5.7M

Select item 36677177.

Mutation of SIMPLE in Charcot–Marie–Tooth 1C alters production of exosomes

Hong Zhu, Sara Guariglia, Raymond Y. L. Yu, Wenjing Li, Deborah Brancho, Hector Peinado, David Lyden, James Salzer, Craig Bennett, Chi-Wing Chow

Mol Biol Cell. 2013 Jun 1; 24(11): 1619–1637. doi: 10.1091/mbc.E12-07-0544

PMCID:: PMC3667717

Abstract Article PDF–4.5M

Select item 35724108.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 35147839.

Charcot-Marie-Tooth disease-linked protein SIMPLE functions with the ESCRT machinery in endosomal trafficking

Samuel M. Lee, Lih-Shen Chin, Lian Li

J Cell Biol. 2012 Nov 26; 199(5): 799–816. doi: 10.1083/jcb.201204137

PMCID:: PMC3514783

Abstract Article PDF–4.2M

Select item 327264910.

Developmental Controls are Re-Expressed during Induction of Neurogenesis in the Neocortex of Young Adult Mice

U. Shivraj Sohur, Paola Arlotta, Jeffrey D. Macklis

Front Neurosci. 2012; 6: 12. Published online 2012 Feb 6. doi: 10.3389/fnins.2012.00012

PMCID:: PMC3272649

Abstract Article PDF–526K

Select item 324849111.

Whole-body deletion of LPS-induced TNF-α factor (LITAF) markedly improves experimental endotoxic shock and inflammatory arthritis

Jamie C. Merrill, Jian You, Cara Constable, Susan E. Leeman, Salomon Amar

Proc Natl Acad Sci U S A. 2011 Dec 27; 108(52): 21247–21252. Published online 2011 Dec 12. doi: 10.1073/pnas.1111492108

PMCID:: PMC3248491

Abstract Article PDF–1.6M

Select item 318416912.

LITAF Mediation of Increased TNF-α Secretion from Inflamed Colonic Lamina Propria Macrophages

Kristen N. Bushell, Susan E. Leeman, Earl Gillespie, Adam C. Gower, Karen L. Reed, Arthur F. Stucchi, James M. Becker, Salomon Amar

PLoS One. 2011; 6(9): e25849. Published online 2011 Sep 30. doi: 10.1371/journal.pone.0025849

PMCID:: PMC3184169

Abstract Article PDF–534K

Select item 318219313.

Novel Regulation of CCL2 Gene Expression by Murine LITAF and STAT6B

Xiaoren Tang, Yu Yang, Salomon Amar

PLoS One. 2011; 6(9): e25083. Published online 2011 Sep 28. doi: 10.1371/journal.pone.0025083

PMCID:: PMC3182193

Abstract Article PDF–848K

Select item 317805914.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 311015115.

A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58

Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara

Dev Cell. Author manuscript; available in PMC 2011 Jun 7.

Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011

PMCID:: PMC3110151

Abstract Article PDF–2.0M

Select item 302253416.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 294351817.

A PTP4A3 Peptide PIMAP39 Modulates TNF-Alpha Levels and Endotoxic Shock

Xiaoren Tang, Timothy Woodward, Salomon Amar

J Innate Immun. 2009 Dec; 2(1): 43–55. Published online 2009 Aug 20. doi: 10.1159/000235685

PMCID:: PMC2943518

Abstract Article PDF–451K

Select item 255627018.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 156008919.

LPS-induced TNF-α factor (LITAF)-deficient mice express reduced LPS-induced cytokine: Evidence for LITAF-dependent LPS signaling pathways

Xiaoren Tang, Daniel Metzger, Susan Leeman, Salomon Amar

Proc Natl Acad Sci U S A. 2006 Sep 12; 103(37): 13777–13782. Published online 2006 Sep 5. doi: 10.1073/pnas.0605988103

Correction in:: Proc Natl Acad Sci U S A. 2007 Feb 20; 104(8): 3015.

PMCID:: PMC1560089

Abstract Article PDF–953K

Select item 122139420.

Identification of multiple proteins expressed in murine embryos as binding partners for the WW domains of the ubiquitin-protein ligase Nedd4.

C N Jolliffe, K F Harvey, B P Haines, G Parasivam, S Kumar

Biochem J. 2000 Nov 1; 351(Pt 3): 557–565.

PMCID:: PMC1221394

Summary PDF–317K

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