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Select item 112903561.

ALDH1A3-acetaldehyde metabolism potentiates transcriptional heterogeneity in melanoma

Yuting Lu, Jana Travnickova, Mihaly Badonyi, Florian Rambow, Andrea Coates, Zaid Khan, Jair Marques, Laura C. Murphy, Pablo Garcia-Martinez, Richard Marais, Pakavarin Louphrasitthiphol, Alex H.Y. Chan, Christopher J. Schofield, Alex von Kriegsheim, Joseph A. Marsh, Valeria Pavet, Owen J. Sansom, Robert S. Illingworth, E. Elizabeth Patton

Cell Rep. 2024 Jul 23; 43(7): 114406. Published online 2024 Jul 3. doi: 10.1016/j.celrep.2024.114406

PMCID:: PMC11290356

Abstract Article

Select item 91887492.

Aldh2 is a lineage-specific metabolic gatekeeper in melanocyte stem cells

Hannah Brunsdon, Alessandro Brombin, Samuel Peterson, John H. Postlethwait, E. Elizabeth Patton

Development. 2022 May 15; 149(10): dev200277. Published online 2022 May 19. doi: 10.1242/dev.200277

PMCID:: PMC9188749

Abstract Article

Select item 84255663.

Is impaired energy production a novel insight into the pathogenesis of pyridoxine-dependent epilepsy due to biallelic variants in ALDH7A1?

Anastasia Minenkova, Erwin E. W. Jansen, Jessie Cameron, Rob Barto, Thomas Hurd, Lauren MacNeil, Gajja S. Salomons, Saadet Mercimek-Andrews

PLoS One. 2021; 16(9): e0257073. Published online 2021 Sep 8. doi: 10.1371/journal.pone.0257073

PMCID:: PMC8425566

Abstract Article PDF–1.2M

Select item 81757014.

Phenotypic analysis of catastrophic childhood epilepsy genes

Aliesha Griffin, Colleen Carpenter, Jing Liu, Rosalia Paterno, Brian Grone, Kyla Hamling, Maia Moog, Matthew T. Dinday, Francisco Figueroa, Mana Anvar, Chinwendu Ononuju, Tony Qu, Scott C. Baraban

Commun Biol. 2021; 4: 680. Published online 2021 Jun 3. doi: 10.1038/s42003-021-02221-y

PMCID:: PMC8175701

Abstract Article PDF–4.4M

Select item 75457145.

Multiple Developmental Defects in sox11a Mutant Zebrafish with Features of Coffin-Siris Syndrome

Shaoting Jia, Xingxing Wu, Yunya Wu, Xuefan Cui, Binbin Tao, Zuoyan Zhu, Wei Hu

Int J Biol Sci. 2020; 16(15): 3039–3049. Published online 2020 Oct 3. doi: 10.7150/ijbs.47510

PMCID:: PMC7545714

Abstract Article PDF–2.8M

Select item 75193786.

Elevated 4-hydroxynonenal induces hyperglycaemia via Aldh3a1 loss in zebrafish and associates with diabetes progression in humans

Bowen Lou, Mike Boger, Katrin Bennewitz, Carsten Sticht, Stefan Kopf, Jakob Morgenstern, Thomas Fleming, Rüdiger Hell, Zuyi Yuan, Peter Paul Nawroth, Jens Kroll

Redox Biol. 2020 Oct; 37: 101723. Published online 2020 Sep 16. doi: 10.1016/j.redox.2020.101723

PMCID:: PMC7519378

Abstract Article PDF–14M

Select item 70063997.

RNA-Seq reveals differential expression profiles and functional annotation of genes involved in retinal degeneration in Pde6c mutant Danio rerio

Madhu Sudhana Saddala, Anton Lennikov, Adam Bouras, Hu Huang

BMC Genomics. 2020; 21: 132. Published online 2020 Feb 7. doi: 10.1186/s12864-020-6550-z

PMCID:: PMC7006399

Abstract Article PDF–2.2M

Select item 69664308.

Omics-based Investigation of Diet-induced Obesity Synergized with HBx, Src, and p53 Mutation Accelerating Hepatocarcinogenesis in Zebrafish Model

Wan-Yu Yang, Pei-Shu Rao, Yong-Chun Luo, Hua-Kuo Lin, Sing-Han Huang, Jinn-Moon Yang, Chiou-Hwa Yuh

Cancers (Basel) 2019 Dec; 11(12): 1899. Published online 2019 Nov 28. doi: 10.3390/cancers11121899

PMCID:: PMC6966430

Abstract Article PDF–5.6M

Select item 66291229.

The combination of loss of glyoxalase1 and obesity results in hyperglycemia

Elisabeth Lodd, Lucas M. Wiggenhauser, Jakob Morgenstern, Thomas H. Fleming, Gernot Poschet, Michael Büttner, Christoph T. Tabler, David P. Wohlfart, Peter P. Nawroth, Jens Kroll

JCI Insight. 2019 Jun 20; 4(12): e126154. Published online 2019 Jun 20. doi: 10.1172/jci.insight.126154

PMCID:: PMC6629122

Abstract Article PDF–6.7M

Select item 644939310.

The maternal to zygotic transition regulates genome-wide heterochromatin establishment in the zebrafish embryo

Kathrin Laue, Srivarsha Rajshekar, Abigail J. Courtney, Zachary A. Lewis, Mary G. Goll

Nat Commun. 2019; 10: 1551. Published online 2019 Apr 4. doi: 10.1038/s41467-019-09582-3

PMCID:: PMC6449393

Abstract Article PDF–3.6M

Select item 571446211.

Pyridoxine-Dependent Epilepsy in Zebrafish Caused by Aldh7a1 Deficiency

Izabella A. Pena, Yann Roussel, Kate Daniel, Kevin Mongeon, Devon Johnstone, Hellen Weinschutz Mendes, Marjolein Bosma, Vishal Saxena, Nathalie Lepage, Pranesh Chakraborty, David A. Dyment, Clara D. M. van Karnebeek, Nanda Verhoeven-Duif, Tuan Vu Bui, Kym M. Boycott, Marc Ekker, Alex MacKenzie

Genetics. 2017 Dec; 207(4): 1501–1518. Published online 2017 Oct 10. doi: 10.1534/genetics.117.300137

PMCID:: PMC5714462

Abstract Article PDF–2.4M

Select item 565016012.

Characterization of the first knock-out aldh7a1 zebrafish model for pyridoxine-dependent epilepsy using CRISPR-Cas9 technology

Nikita Zabinyakov, Garrett Bullivant, Feng Cao, Matilde Fernandez Ojeda, Zheng Ping Jia, Xiao-Yan Wen, James J. Dowling, Gajja S. Salomons, Saadet Mercimek-Andrews

PLoS One. 2017; 12(10): e0186645. Published online 2017 Oct 20. doi: 10.1371/journal.pone.0186645

PMCID:: PMC5650160

Abstract Article PDF–2.7M

Select item 548917613.

Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts

Con Sullivan, Christopher R. Lage, Jeffrey A. Yoder, John H. Postlethwait, Carol H. Kim

PLoS One. 2017; 12(6): e0179517. Published online 2017 Jun 28. doi: 10.1371/journal.pone.0179517

PMCID:: PMC5489176

Abstract Article PDF–4.9M

Select item 533797414.

Evolution of complexity in the zebrafish synapse proteome

Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant

Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613

PMCID:: PMC5337974

Abstract Article PDF–2.0M

Select item 487073215.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 463413716.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 408695817.

aldh7a1 Regulates Eye and Limb Development in Zebrafish

Holly E. Babcock, Sunit Dutta, Ramakrishna P. Alur, Chad Brocker, Vasilis Vasiliou, Susan Vitale, Mones Abu-Asab, Brian P. Brooks

PLoS One. 2014; 9(7): e101782. Published online 2014 Jul 8. doi: 10.1371/journal.pone.0101782

PMCID:: PMC4086958

Abstract Article PDF–3.9M

Select item 368495318.

ALDH2 Mediates 5-Nitrofuran Activity in Multiple Species

Linna Zhou, Hironori Ishizaki, Michaela Spitzer, Kerrie L. Taylor, Nicholas D. Temperley, Stephen L. Johnson, Paul Brear, Philippe Gautier, Zhiqiang Zeng, Amy Mitchell, Vikram Narayan, Ewan M. McNeil, David W. Melton, Terry K. Smith, Mike Tyers, Nicholas J. Westwood, E. Elizabeth Patton

Chem Biol. 2012 Jul 27; 19(7): 883–892. doi: 10.1016/j.chembiol.2012.05.017

Correction in:: Cell Chem Biol. 2020 Nov 19; 27(11): 1452.

PMCID:: PMC3684953

Abstract Article PDF–2.7M

Select item 317805919.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 119954620.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305