PMC Links for GEO Profiles (Select 66453625) - PMC

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Items: 16

Select item 70126071.

Notochord vacuoles absorb compressive bone growth during zebrafish spine formation

Jennifer Bagwell, James Norman, Kathryn Ellis, Brianna Peskin, James Hwang, Xiaoyan Ge, Stacy V Nguyen, Sarah K McMenamin, Didier YR Stainier, Michel Bagnat

eLife. 2020; 9: e51221. Published online 2020 Jan 29. doi: 10.7554/eLife.51221

PMCID:: PMC7012607

Abstract Article PDF–7.2M

Select item 67833622.

Lysosome-rich enterocytes mediate protein absorption in the vertebrate gut

Jieun Park, Daniel S. Levic, Kaelyn D. Sumigray, Jennifer Bagwell, Oznur Eroglu, Carina Block, Cagla Eroglu, Robert Barry, Colin R. Lickwar, John F. Rawls, Stephen A. Watts, Terry Lechler, Michel Bagnat

Dev Cell. Author manuscript; available in PMC 2020 Oct 7.

Published in final edited form as: Dev Cell. 2019 Oct 7; 51(1): 7–20.e6. Published online 2019 Aug 29. doi: 10.1016/j.devcel.2019.08.001

PMCID:: PMC6783362

Abstract Article PDF–3.9M

Select item 61582093.

Tissue self-organization underlies morphogenesis of the notochord

James Norman, Emma L. Sorrell, Yi Hu, Vaishnavi Siripurapu, Jamie Garcia, Jennifer Bagwell, Patrick Charbonneau, Sharon R. Lubkin, Michel Bagnat

Philos Trans R Soc Lond B Biol Sci. 2018 Nov 5; 373(1759): 20170320. Published online 2018 Sep 24. doi: 10.1098/rstb.2017.0320

PMCID:: PMC6158209

Abstract Article PDF–1.5M

Select item 55260844.

Sheath cell invasion and trans-differentiation repair mechanical damage caused by loss of caveolae in the zebrafish notochord

Jamie Garcia, Jennifer Bagwell, Brian Njaine, James Norman, Daniel S. Levic, Susan Wopat, Sara E. Miller, Xiaojing Liu, Jason W. Locasale, Didier Y.R. Stainier, Michel Bagnat

Curr Biol. Author manuscript; available in PMC 2018 Jul 10.

Published in final edited form as: Curr Biol. 2017 Jul 10; 27(13): 1982–1989.e3. Published online 2017 Jun 22. doi: 10.1016/j.cub.2017.05.035

PMCID:: PMC5526084

Abstract Article PDF–1.0M

Select item 53832155.

A plasmid library of full-length zebrafish rab proteins for in vivo cell biology

Thomas E. Hall, Nick Martel, Harriet P. Lo, Zherui Xiong, Robert G. Parton

Cell Logist. 2017; 7(1): e1301151. Published online 2017 Mar 1. doi: 10.1080/21592799.2017.1301151

PMCID:: PMC5383215

Abstract Article PDF–635K

Select item 53521376.

TFAP2 paralogs regulate melanocyte differentiation in parallel with MITF

Hannah E. Seberg, Eric Van Otterloo, Stacie K. Loftus, Huan Liu, Greg Bonde, Ramakrishna Sompallae, Derek E. Gildea, Juan F. Santana, J. Robert Manak, William J. Pavan, Trevor Williams, Robert A. Cornell

PLoS Genet. 2017 Mar; 13(3): e1006636. Published online 2017 Mar 1. doi: 10.1371/journal.pgen.1006636

PMCID:: PMC5352137

Abstract Article PDF–3.0M

Select item 48707327.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 47287748.

Rab32 and Rab38 genes in chordate pigmentation: an evolutionary perspective

Ugo Coppola, Giovanni Annona, Salvatore D’Aniello, Filomena Ristoratore

BMC Evol Biol. 2016; 16: 26. Published online 2016 Jan 27. doi: 10.1186/s12862-016-0596-1

PMCID:: PMC4728774

Abstract Article PDF–2.9M

Select item 46341379.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 358782510.

Notochord vacuoles are lysosome-related organelles that function in axis and spine morphogenesis

Kathryn Ellis, Jennifer Bagwell, Michel Bagnat

J Cell Biol. 2013 Mar 4; 200(5): 667–679. doi: 10.1083/jcb.201212095

PMCID:: PMC3587825

Abstract Article PDF–3.3M

Select item 317805911.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 311933712.

prdm1a regulates sox10 and islet1 in the development of neural crest and Rohon-Beard sensory neurons

Eugenia Olesnicky, Laura Hernandez-Lagunas, Kristin Bruk Artinger

Genesis. Author manuscript; available in PMC 2011 Nov 2.

Published in final edited form as: Genesis. 2010 Nov; 48(11): 656–666. Published online 2010 Nov 2. doi: 10.1002/dvg.20673

PMCID:: PMC3119337

Abstract Article PDF–3.5M

Select item 283928113.

Pigmentation Pathway Evolution after Whole-Genome Duplication in Fish

Ingo Braasch, Frédéric Brunet, Jean-Nicolas Volff, Manfred Schartl

Genome Biol Evol. 2009; 1: 479–493. Published online 2009 Nov 25. doi: 10.1093/gbe/evp050

PMCID:: PMC2839281

Abstract Article PDF–808K

Select item 266352414.

Gene Expression Profiling of Zebrafish Embryonic Retina

YUK FAI LEUNG, JOHN E. DOWLING

Invest Ophthalmol Vis Sci. Author manuscript; available in PMC 2009 Mar 31.

Published in final edited form as: Invest Ophthalmol Vis Sci. 2007 Feb; 48(2): 881–890. doi: 10.1167/iovs.06-0723

PMCID:: PMC2663524

Abstract Article PDF–1.3M

Select item 119954615.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305