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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 101069833.

DASH/Dam1 complex mutants stabilize ploidy in histone‐humanized yeast by weakening kinetochore‐microtubule attachments

Max A B Haase, Guðjón Ólafsson, Rachel L Flores, Emmanuel Boakye‐Ansah, Alex Zelter, Miles Sasha Dickinson, Luciana Lazar‐Stefanita, David M Truong, Charles L Asbury, Trisha N Davis, Jef D Boeke

EMBO J. 2023 Apr; 42(8): e112600. Published online 2023 Jan 18. doi: 10.15252/embj.2022112600

PMCID:: PMC10106983

Abstract Article PDF–4.3M

Select item 101069824.

Adaptation to high rates of chromosomal instability and aneuploidy through multiple pathways in budding yeast

Matthew N Clarke, Theodor Marsoner, Manuel Alonso Y Adell, Madhwesh C Ravichandran, Christopher S Campbell

EMBO J. 2023 Apr; 42(8): e111500. Published online 2022 Dec 19. doi: 10.15252/embj.2022111500

PMCID:: PMC10106982

Abstract Article PDF–1.2M

Select item 92098115.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 89721866.

Three interacting regions of the Ndc80 and Dam1 complexes support microtubule tip-coupling under load

Rachel L. Flores, Zachary E. Peterson, Alex Zelter, Michael Riffle, Charles L. Asbury, Trisha N. Davis

J Cell Biol. 2022 May 2; 221(5): e202107016. Published online 2022 Mar 30. doi: 10.1083/jcb.202107016

PMCID:: PMC8972186

Abstract Article PDF–5.1M

Select item 84414107.

Phospho‐regulated Bim1/EB1 interactions trigger Dam1c ring assembly at the budding yeast outer kinetochore

Alexander Dudziak, Lena Engelhard, Cole Bourque, Björn Udo Klink, Pascaline Rombaut, Nikolay Kornakov, Karolin Jänen, Franz Herzog, Christos Gatsogiannis, Stefan Westermann

EMBO J. 2021 Sep 15; 40(18): e108004. Published online 2021 Jul 27. doi: 10.15252/embj.2021108004

PMCID:: PMC8441410

Abstract Article PDF–4.0M

Select item 80508438.

Aurora B switches relative strength of kinetochore–microtubule attachment modes for error correction

Harinath Doodhi, Taciana Kasciukovic, Lesley Clayton, Tomoyuki U. Tanaka

J Cell Biol. 2021 Jun 7; 220(6): e202011117. Published online 2021 Apr 14. doi: 10.1083/jcb.202011117

PMCID:: PMC8050843

Abstract Article PDF–5.3M

Select item 77187519.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 761555010.

Structural mechanism of outer kinetochore Dam1:Ndc80 complex assembly on microtubules

Kyle W. Muir, Christopher Batters, Tom Dendooven, Jing Yang, Ziguo Zhang, Alister Burt, David Barford

Science. Author manuscript; available in PMC 2024 Jan 19.

Published in final edited form as: Science. 2023 Dec 8; 382(6675): 1184–1190. Published online 2023 Dec 7. doi: 10.1126/science.adj8736

PMCID:: PMC7615550

Abstract Article PDF–2.3M

Select item 749778011.

Cdk1 Phosphorylation of the Dam1 Complex Strengthens Kinetochore-Microtubule Attachments

Abraham Gutierrez, Jae ook Kim, Neil T. Umbreit, Charles L. Asbury, Trisha N. Davis, Matthew P. Miller, Sue Biggins

Curr Biol. 2020 Nov 16; 30(22): 4491–4499.e5. Published online 2020 Sep 17. doi: 10.1016/j.cub.2020.08.054

PMCID:: PMC7497780

Abstract Article PDF–2.1M

Select item 681559112.

Structure of the DASH/Dam1 Complex Shows its Role at the Yeast Kinetochore-Microtubule Interface

Simon Jenni, Stephen C. Harrison

Science. Author manuscript; available in PMC 2019 Oct 27.

Published in final edited form as: Science. 2018 May 4; 360(6388): 552–558. doi: 10.1126/science.aar6436

PMCID:: PMC6815591

Abstract Article PDF–2.3M

Select item 660580113.

The stoichiometry of the outer kinetochore is modulated by microtubule-proximal regulatory factors

Karthik Dhatchinamoorthy, Jay R. Unruh, Jeffrey J. Lange, Michaella Levy, Brian D. Slaughter, Jennifer L. Gerton

J Cell Biol. 2019 Jul 1; 218(7): 2124–2135. Published online 2019 May 22. doi: 10.1083/jcb.201810070

PMCID:: PMC6605801

Abstract Article PDF–2.6M

Select item 576535914.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 567489315.

Structural plasticity of the living kinetochore

Karthik Dhatchinamoorthy, Manjunatha Shivaraju, Jeffrey J. Lange, Boris Rubinstein, Jay R. Unruh, Brian D. Slaughter, Jennifer L. Gerton

J Cell Biol. 2017 Nov 6; 216(11): 3551–3570. doi: 10.1083/jcb.201703152

PMCID:: PMC5674893

Abstract Article PDF–3.7M

Select item 556293716.

Exploring Genetic Suppression Interactions on a Global Scale

Jolanda van Leeuwen, Carles Pons, Joseph C. Mellor, Takafumi N. Yamaguchi, Helena Friesen, John Koschwanez, Mojca Mattiazzi Ušaj, Maria Pechlaner, Mehmet Takar, Matej Ušaj, Benjamin VanderSluis, Kerry Andrusiak, Pritpal Bansal, Anastasia Baryshnikova, Claire Boone, Jessica Cao, Atina Cote, Marinella Gebbia, Gene Horecka, Ira Horecka, Elena Kuzmin, Nicole Legro, Wendy Liang, Natascha van Lieshout, Margaret McNee, Bryan-Joseph San Luis, Fatemeh Shaeri, Ermira Shuteriqi, Song Sun, Lu Yang, Ji-Young Youn, Michael Yuen, Michael Costanzo, Anne-Claude Gingras, Patrick Aloy, Chris Oostenbrink, Andrew Murray, Todd R. Graham, Chad L. Myers, Brenda J. Andrews, Frederick P. Roth, Charles Boone

Science. Author manuscript; available in PMC 2017 Aug 19.

Published in final edited form as: Science. 2016 Nov 4; 354(6312): aag0839. doi: 10.1126/science.aag0839

PMCID:: PMC5562937

Abstract Article PDF–2.5M

Select item 535451817.

The Ndc80 complex bridges two Dam1 complex rings

Jae ook Kim, Alex Zelter, Neil T Umbreit, Athena Bollozos, Michael Riffle, Richard Johnson, Michael J MacCoss, Charles L Asbury, Trisha N Davis

eLife. 2017; 6: e21069. Published online 2017 Feb 13. doi: 10.7554/eLife.21069

PMCID:: PMC5354518

Abstract Article PDF–5.3M

Select item 520434818.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116

Correction in:: Genome Res. 2017 Apr; 27(4): 663.

PMCID:: PMC5204348

Abstract Article PDF–1.3M

Select item 482123919.

Molecular architecture of the Dam1 complex–microtubule interaction

Thibault Legal, Juan Zou, Alicja Sochaj, Juri Rappsilber, Julie P. I. Welburn

Open Biol. 2016 Mar; 6(3): 150237. Published online 2016 Mar 9. doi: 10.1098/rsob.150237

PMCID:: PMC4821239

Abstract Article PDF–1.3M

Select item 481435920.

How the kinetochore couples microtubule force and centromere stretch to move chromosomes

Aussie Suzuki, Benjamin L. Badger, Julian Haase, Tomoo Ohashi, Harold P. Erickson, Edward D. Salmon, Kerry Bloom

Nat Cell Biol. Author manuscript; available in PMC 2016 Sep 14.

Published in final edited form as: Nat Cell Biol. 2016 Apr; 18(4): 382–392. Published online 2016 Mar 14. doi: 10.1038/ncb3323

PMCID:: PMC4814359

Abstract Article PDF–1.7M

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