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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107116652.

The ribosome‐associated chaperone Zuo1 controls translation upon TORC1 inhibition

Ailsa Black, Thomas D Williams, Flavie Soubigou, Ifeoluwapo M Joshua, Houjiang Zhou, Frederic Lamoliatte, Adrien Rousseau

EMBO J. 2023 Dec; 42(24): e113240. Published online 2023 Nov 20. doi: 10.15252/embj.2022113240

PMCID:: PMC10711665

Abstract Article PDF–4.0M

Select item 107001383.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102333684.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 96309865.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 92098116.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 89193377.

Selective microautophagy of proteasomes is initiated by ESCRT-0 and is promoted by proteasome ubiquitylation

Jianhui Li, Mark Hochstrasser

J Cell Sci. 2022 Feb 15; 135(4): jcs259393. Published online 2022 Feb 21. doi: 10.1242/jcs.259393

PMCID:: PMC8919337

Abstract Article

Select item 86644248.

Rapid conversion of replicating and integrating Saccharomyces cerevisiae plasmid vectors via Cre recombinase

Daniel P Nickerson, Monique A Quinn, Joshua M Milnes

G3 (Bethesda) 2021 Dec; 11(12): jkab336. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab336

PMCID:: PMC8664424

Abstract Article PDF–1.6M

Select item 85769179.

Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis

Emmanuel T. Nsamba, Abesh Bera, Michael Costanzo, Charles Boone, Mohan L. Gupta, Jr.

J Cell Biol. 2021 Dec 6; 220(12): e202010155. Published online 2021 Nov 5. doi: 10.1083/jcb.202010155

PMCID:: PMC8576917

Abstract Article PDF–7.4M

Select item 851195010.

The histone chaperone Spt6 is required for normal recruitment of the capping enzyme Abd1 to transcribed regions

Rajaraman Gopalakrishnan, Fred Winston

J Biol Chem. 2021 Oct; 297(4): 101205. Published online 2021 Sep 17. doi: 10.1016/j.jbc.2021.101205

PMCID:: PMC8511950

Abstract Article PDF–3.1M

Select item 828266411.

Ist2 recruits the lipid transporters Osh6/7 to ER–PM contacts to maintain phospholipid metabolism

Andrew King On Wong, Barry Paul Young, Christopher J.R. Loewen

J Cell Biol. 2021 Sep 6; 220(9): e201910161. Published online 2021 Jul 14. doi: 10.1083/jcb.201910161

PMCID:: PMC8282664

Abstract Article PDF–7.6M

Select item 825961312.

Genetically encoded multimode reporter of adaptor protein 3 (AP-3) traffic in budding yeast

Rachael L. Plemel, Greg Odorizzi, Alexey J. Merz

Traffic. Author manuscript; available in PMC 2021 Jul 6.

Published in final edited form as: Traffic. 2021 Jan; 22(1-2): 38–44. Published online 2020 Dec 7. doi: 10.1111/tra.12772

PMCID:: PMC8259613

Abstract Article PDF–1.8M

Select item 824085613.

Bro1 stimulates Vps4 to promote intralumenal vesicle formation during multivesicular body biogenesis

Chun-Che Tseng, Shirley Dean, Brian A. Davies, Ishara F. Azmi, Natalya Pashkova, Johanna A. Payne, Jennifer Staffenhagen, Matt West, Robert C. Piper, Greg Odorizzi, David J. Katzmann

J Cell Biol. 2021 Aug 2; 220(8): e202102070. Published online 2021 Jun 23. doi: 10.1083/jcb.202102070

Correction in:: J Cell Biol. 2021 Aug 2; 220(8): e20210207007022021c.

PMCID:: PMC8240856

Abstract Article PDF–6.1M

Select item 810851114.

Atg15 in Saccharomyces cerevisiae consists of two functionally distinct domains

Eri Hirata, Kyo Shirai, Tatsuya Kawaoka, Kosuke Sato, Fumito Kodama, Kuninori Suzuki

Mol Biol Cell. 2021 Apr 15; 32(8): 645–663. doi: 10.1091/mbc.E20-07-0500

PMCID:: PMC8108511

Abstract Article PDF–3.9M

Select item 794844815.

14-3-3 Protein Bmh1 triggers short-range compaction of mitotic chromosomes by recruiting sirtuin deacetylase Hst2

Neha Jain, Petra Janning, Heinz Neumann

J Biol Chem. 2021 Jan-Jun; 296: 100078. Published online 2020 Nov 23. doi: 10.1074/jbc.AC120.014758

PMCID:: PMC7948448

Abstract Article PDF–1.3M

Select item 793943516.

HIV-1 Gag release from yeast reveals ESCRT interaction with the Gag N-terminal protein region

Birgit Meusser, Bettina Purfuerst, Friedrich C. Luft

J Biol Chem. 2020 Dec 25; 295(52): 17950–17972. Published online 2021 Jan 13. doi: 10.1074/jbc.RA120.014710

PMCID:: PMC7939435

Abstract Article PDF–5.5M

Select item 772147517.

A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits

Florian Wilfling, Chia-Wei Lee, Philipp S. Erdmann, Yumei Zheng, Dawafuti Sherpa, Stefan Jentsch, Boris Pfander, Brenda A. Schulman, Wolfgang Baumeister

Mol Cell. 2020 Dec 3; 80(5): 764–778.e7. doi: 10.1016/j.molcel.2020.10.030