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Items: 1 to 20 of 31

1.
Long noncoding RNA SNHG1 alleviates high glucose-induced vascular smooth muscle cells calcification/senescence by post-transcriptionally regulating Bhlhe40 and autophagy via Atg10
Shuang Li, Yuqing Ni, Chen Li, Qunyan Xiang, Yan Zhao, Hui Xu, Wu Huang, Yanjiao Wang, Yi Wang, Junkun Zhan, Youshuo Liu
J Physiol Biochem. 2023; 79(1): 83–105. Published online 2022 Oct 4. doi: 10.1007/s13105-022-00924-2
PMCID:
PMC9905201
AbstractArticlePDF–6.3M
2.
The prognostic value of autophagy related genes with potential protective function in Ewing sarcoma
Jian Wen, Lijia Wan, Xieping Dong
BMC Bioinformatics. 2022; 23: 306. Published online 2022 Jul 28. doi: 10.1186/s12859-022-04849-x
PMCID:
PMC9335970
AbstractArticlePDF–5.4M
3.
A dual-activity topoisomerase complex regulates mRNA translation and turnover
Shuaikun Su, Yutong Xue, Alexei Sharov, Yongqing Zhang, Seung Kyu Lee, Jennifer L Martindale, Wen Li, Wai Lim Ku, Keji Zhao, Supriyo De, Weiping Shen, Payel Sen, Myriam Gorospe, Dongyi Xu, Weidong Wang
Nucleic Acids Res. 2022 Jul 8; 50(12): 7013–7033. Published online 2022 Jun 24. doi: 10.1093/nar/gkac538
PMCID:
PMC9262614
AbstractArticlePDF–3.6M
4.
Analysis of rs1864182 and rs1864183 variants in ATG10 gene and antineutrophil cytoplasmic autoantibody‐associated vasculitis in Chinese Guangxi population
Shanshan Huang, Jinlan Rao, Jingsi Wei, Qunshen Huang, Yan Zhu, Wei Li, Chao Xue
J Clin Lab Anal. 2022 Feb; 36(2): e24193. Published online 2021 Dec 27. doi: 10.1002/jcla.24193
PMCID:
PMC8841139
AbstractArticlePDF–373K
5.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
6.
A study on the potential role of autophagy‐related protein 10 as a biomarker for ulcerative colitis
Fatemeh Abbasi Teshnizi, Nasrin Kazemipour, Saeed Nazifi, Kamran Bagheri Lankarani, Masood Sepehrimanesh, Iman Razeghian Jahromi
Physiol Rep. 2021 Apr; 9(7): e14825. Published online 2021 Apr 27. doi: 10.14814/phy2.14825
PMCID:
PMC8077160
AbstractArticlePDF–600K
7.
A new transcription factor ATG10S activates IFNL2 transcription by binding at an IRF1 site in HepG2 cells
Miao-Qing Zhang, Qiong Zhao, Jing-Pu Zhang
Autophagy. 2020; 16(12): 2167–2179. Published online 2020 Jan 29. doi: 10.1080/15548627.2020.1719681
PMCID:
PMC7751675
AbstractArticlePDF–5.6M
8.
Receptor‐mediated clustering of FIP200 bypasses the role of LC3 lipidation in autophagy
Amelia E Ohnstad, Jose M Delgado, Brian J North, Isha Nasa, Arminja N Kettenbach, Sebastian W Schultz, Christopher J Shoemaker
EMBO J. 2020 Dec 15; 39(24): e104948. Published online 2020 Nov 23. doi: 10.15252/embj.2020104948
PMCID:
PMC7737610
AbstractArticlePDF–3.7M
9.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
10.
Potentially functional variants of autophagy‐related genes are associated with the efficacy and toxicity of radiotherapy in patients with nasopharyngeal carcinoma
Zhiguang Yang, Zhaoyu Liu
Mol Genet Genomic Med. 2019 Dec; 7(12): e1030. Published online 2019 Nov 6. doi: 10.1002/mgg3.1030
PMCID:
PMC6900379
AbstractArticlePDF–415K
11.
Differential Effects of Autophagy-Related 10 Protein on HCV Replication and Autophagy Flux Are Mediated by Its Cysteine44 and Cysteine135
Miao-Qing Zhang, Jian-Rui Li, Zong-Gen Peng, Jing-Pu Zhang
Front Immunol. 2018; 9: 2176. Published online 2018 Sep 24. doi: 10.3389/fimmu.2018.02176
PMCID:
PMC6165859
AbstractArticlePDF–5.1M
12.
Dual Roles of Two Isoforms of Autophagy-related Gene ATG10 in HCV-Subgenomic replicon Mediated Autophagy Flux and Innate Immunity
Qiong Zhao, Zhan-Ying Hu, Jing-Pu Zhang, Jian-Dong Jiang, Yuan-yuan Ma, Jian-rui Li, Zong-gen Peng, Jin-hua Chen
Sci Rep. 2017; 7: 11250. Published online 2017 Sep 12. doi: 10.1038/s41598-017-11105-3
PMCID:
PMC5595887
AbstractArticlePDF–5.7M
13.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
14.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
15.
Burkholderia pseudomallei survival in lung epithelial cells benefits from miRNA-mediated suppression of ATG10
Qian Li, Yao Fang, Pan Zhu, Chun-yan Ren, Hai Chen, Jiang Gu, Yin-ping Jia, Kun Wang, Wen-de Tong, Wei-jun Zhang, Jing Pan, Dong-shui Lu, Bin Tang, Xu-hu Mao
Autophagy. 2015 Aug; 11(8): 1293–1307. Published online 2015 Sep 14. doi: 10.1080/15548627.2015.1058474
PMCID:
PMC4590646
AbstractArticlePDF–1.7M
16.
Increased Expression of ATG10 in Colorectal Cancer Is Associated with Lymphovascular Invasion and Lymph Node Metastasis
Yoon Kyung Jo, Seung Cheol Kim, In Ja Park, So Jung Park, Dong-Hoon Jin, Seung-Woo Hong, Dong-Hyung Cho, Jin Cheon Kim
PLoS One. 2012; 7(12): e52705. Published online 2012 Dec 20. doi: 10.1371/journal.pone.0052705
PMCID:
PMC3527592
AbstractArticlePDF–432K
17.
IRGM Is a Common Target of RNA Viruses that Subvert the Autophagy Network
Isabel Pombo Grégoire, Clémence Richetta, Laurène Meyniel-Schicklin, Sophie Borel, Fabrine Pradezynski, Olivier Diaz, Alexandre Deloire, Olga Azocar, Joël Baguet, Marc Le Breton, Philippe E. Mangeot, Vincent Navratil, Pierre-Emmanuel Joubert, Monique Flacher, Pierre-Olivier Vidalain, Patrice André, Vincent Lotteau, Martine Biard-Piechaczyk, Chantal Rabourdin-Combe, Mathias Faure
PLoS Pathog. 2011 Dec; 7(12): e1002422. Published online 2011 Dec 8. doi: 10.1371/journal.ppat.1002422
PMCID:
PMC3234227
AbstractArticlePDF–1.9M
18.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
19.
ATG12 Conjugation to ATG3 Regulates Mitochondrial Homeostasis and Cell Death
Lilliana Radoshevich, Lyndsay Murrow, Nan Chen, Estefania Fernandez, Srirupa Roy, Christopher Fung, Jayanta Debnath
Cell. Author manuscript; available in PMC 2011 Aug 20.
Published in final edited form as: Cell. 2010 Aug 20; 142(4): 590–600. doi: 10.1016/j.cell.2010.07.018
PMCID:
PMC2925044
AbstractArticlePDF–2.2M
20.
Network organization of the human autophagy system
Christian Behrends, Mathew E. Sowa, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2011 Jan 1.
Published in final edited form as: Nature. 2010 Jul 1; 466(7302): 68–76. Published online 2010 Jun 20. doi: 10.1038/nature09204
PMCID:
PMC2901998
AbstractArticlePDF–1.4M

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