PMC Links for GEO Profiles (Select 77160227) - PMC

Select item 105703091.

ADRA2A and IRX1 are putative risk genes for Raynaud’s phenomenon

Sylvia Hartmann, Summaira Yasmeen, Benjamin M. Jacobs, Spiros Denaxas, Munir Pirmohamed, Eric R. Gamazon, Mark J. Caulfield, Genes & Health Research Team, Harry Hemingway, Maik Pietzner, Claudia Langenberg

Nat Commun. 2023; 14: 6156. Published online 2023 Oct 12. doi: 10.1038/s41467-023-41876-5

PMCID:: PMC10570309

Abstract Article PDF–1.3M

Select item 89522102.

The Hematopoietic TALE-Code Shows Normal Activity of IRX1 in Myeloid Progenitors and Reveals Ectopic Expression of IRX3 and IRX5 in Acute Myeloid Leukemia

Stefan Nagel, Claudia Pommerenke, Corinna Meyer, Roderick A. F. MacLeod

Int J Mol Sci. 2022 Mar; 23(6): 3192. Published online 2022 Mar 16. doi: 10.3390/ijms23063192

PMCID:: PMC8952210

Abstract Article PDF–6.5M

Select item 81650303.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 80090484.

Impact of cytosine methylation on DNA binding specificities of human transcription factors

Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale

Science. Author manuscript; available in PMC 2021 Mar 30.

Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239

PMCID:: PMC8009048

Abstract Article PDF–2.6M

Select item 78511125.

HOXA9/IRX1 expression pattern defines two subgroups of infant MLL-AF4-driven acute lymphoblastic leukemia

Vasiliki Symeonidou, Katrin Ottersbach

Exp Hematol. 2021 Jan; 93: 38–43.e5. doi: 10.1016/j.exphem.2020.10.002

PMCID:: PMC7851112

Abstract Article PDF–3.7M

Select item 69276926.

IRX1 hypermethylation promotes heart failure by inhibiting CXCL14 expression

Longhuan Zeng, Nanyuan Gu, Jiayi Chen, Guangyong Jin, Yongke Zheng

Cell Cycle. 2019; 18(23): 3251–3262. Published online 2019 Oct 22. doi: 10.1080/15384101.2019.1673099

PMCID:: PMC6927692

Abstract Article PDF–3.1M

Select item 55487587.

Duplication events downstream of IRX1 cause North Carolina macular dystrophy at the MCDR3 locus

Valentina Cipriani, Raquel S. Silva, Gavin Arno, Nikolas Pontikos, Ambreen Kalhoro, Sandra Valeina, Inna Inashkina, Mareta Audere, Katrina Rutka, Bernard Puech, Michel Michaelides, Veronica van Heyningen, Baiba Lace, Andrew R. Webster, Anthony T. Moore

Sci Rep. 2017; 7: 7512. Published online 2017 Aug 8. doi: 10.1038/s41598-017-06387-6

PMCID:: PMC5548758

Abstract Article PDF–1.5M

Select item 44631988.

IRX1 hypomethylation promotes osteosarcoma metastasis via induction of CXCL14/NF-κB signaling

Jinchang Lu, Guohui Song, Qinglian Tang, Changye Zou, Feng Han, Zhiqiang Zhao, Bicheng Yong, Junqiang Yin, Huaiyuan Xu, Xianbiao Xie, Tiebang Kang, YingLee Lam, Huiling Yang, Jingnan Shen, Jin Wang

J Clin Invest. 2015 May 1; 125(5): 1839–1856. Published online 2015 Mar 30. doi: 10.1172/JCI78437

PMCID:: PMC4463198

Abstract Article PDF–10M

Select item 38878909.

Hypermethylation of EBF3 and IRX1 Genes in Synovial Fibroblasts of Patients with Rheumatoid Arthritis

Sung-Hoon Park, Seong-Kyu Kim, Jung-Yoon Choe, Youngho Moon, Sungwhan An, Mae Ja Park, Dong Sun Kim

Mol Cells. 2013 Apr 30; 35(4): 298–304. Published online 2013 Feb 26. doi: 10.1007/s10059-013-2302-0

PMCID:: PMC3887890

Abstract Article PDF–15M

Select item 352727610.

A Synthetic Interaction Screen Identifies Factors Selectively Required for Proliferation and TERT Transcription in p53-Deficient Human Cancer Cells

Li Xie, Claude Gazin, Sung Mi Park, Lihua J. Zhu, Marie-anne Debily, Ellen L. W. Kittler, Maria L. Zapp, David Lapointe, Stephane Gobeil, Ching-Man Virbasius, Michael R. Green

PLoS Genet. 2012 Dec; 8(12): e1003151. Published online 2012 Dec 20. doi: 10.1371/journal.pgen.1003151

PMCID:: PMC3527276

Abstract Article PDF–1.8M

Select item 336713111.

Genome-Wide Association Study of Antibody Response to Smallpox Vaccine

Inna G. Ovsyannikova, Richard B. Kennedy, Megan O'Byrne, Robert M. Jacobson, V. Shane Pankratz, Gregory A. Poland

Vaccine. Author manuscript; available in PMC 2013 Jun 13.

Published in final edited form as: Vaccine. 2012 Jun 13; 30(28): 4182–4189. Published online 2012 Apr 25. doi: 10.1016/j.vaccine.2012.04.055

PMCID:: PMC3367131

Abstract Article PDF–1.3M

Select item 320873912.

IRX1 influences peritoneal spreading and metastasis via inhibiting BDKRB2-dependent neovascularization on gastric cancer

J Jiang, W Liu, X Guo, R Zhang, Q Zhi, J Ji, J Zhang, X Chen, J Li, J Zhang, Q Gu, B Liu, Z Zhu, Y Yu

Oncogene. 2011 Nov 3; 30(44): 4498–4508. Published online 2011 May 23. doi: 10.1038/onc.2011.154

PMCID:: PMC3208739

Abstract Article PDF–985K

Select item 317805913.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 299284814.

A Three-Stage Genome-Wide Association Study of General Cognitive Ability: Hunting the Small Effects

Oliver S. P. Davis, Lee M. Butcher, Sophia J. Docherty, Emma L. Meaburn, Charles J. C. Curtis, Michael A. Simpson, Leonard C. Schalkwyk, Robert Plomin

Behav Genet. 2010; 40(6): 759–767. Published online 2010 Mar 21. doi: 10.1007/s10519-010-9350-4

PMCID:: PMC2992848

Abstract Article PDF–376K

Select item 268304715.

Ubiquitin-mediated proteolysis of HuR by heat shock

Kotb Abdelmohsen, Subramanya Srikantan, Xiaoling Yang, Ashish Lal, Hyeon Ho Kim, Yuki Kuwano, Stefanie Galban, Kevin G Becker, Davida Kamara, Rafael de Cabo, Myriam Gorospe

EMBO J. 2009 May 6; 28(9): 1271–1282. Published online 2009 Mar 26. doi: 10.1038/emboj.2009.67

PMCID:: PMC2683047

Abstract Article PDF–1.4M

Select item 52892816.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 13924117.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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