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Items: 1 to 20 of 35

1.
Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability
Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai
Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108
PMCID:
PMC10551700
AbstractArticlePDF–3.7M
2.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
Low Toxicological Impact of Commercial Pristine Multi-Walled Carbon Nanotubes on the Yeast Saccharomyces cerevisiae
Sonia Martel Martín, Rocío Barros, Brixhilda Domi, Carlos Rumbo, Matteo Poddighe, Santiago Aparicio, Maria Suarez-Diez, Juan Antonio Tamayo-Ramos
Nanomaterials (Basel) 2021 Sep; 11(9): 2272. Published online 2021 Sep 1. doi: 10.3390/nano11092272
PMCID:
PMC8471963
AbstractArticlePDF–2.4M
5.
The yeast FIT2 homologs are necessary to maintain cellular proteostasis and membrane lipid homeostasis
Wei Sheng Yap, Peter Shyu, Jr, Maria Laura Gaspar, Stephen A. Jesch, Charlie Marvalim, William A. Prinz, Susan A. Henry, Guillaume Thibault
J Cell Sci. 2020 Nov 1; 133(21): jcs248526. Published online 2020 Nov 5. doi: 10.1242/jcs.248526
PMCID:
PMC7657468
AbstractArticle
6.
Estimating the protein burden limit of yeast cells by measuring the expression limits of glycolytic proteins
Yuichi Eguchi, Koji Makanae, Tomohisa Hasunuma, Yuko Ishibashi, Keiji Kito, Hisao Moriya
eLife. 2018; 7: e34595. Published online 2018 Aug 10. doi: 10.7554/eLife.34595
PMCID:
PMC6086662
AbstractArticlePDF–4.7M
7.
Laboratory evolution for forced glucose-xylose co-consumption enables identification of mutations that improve mixed-sugar fermentation by xylose-fermenting Saccharomyces cerevisiae
Ioannis Papapetridis, Maarten D Verhoeven, Sanne J Wiersma, Maaike Goudriaan, Antonius J A van Maris, Jack T Pronk
FEMS Yeast Res. 2018 Sep; 18(6): foy056. Published online 2018 May 15. doi: 10.1093/femsyr/foy056
PMCID:
PMC6001886
AbstractArticlePDF–2.3M
8.
A 2-Deoxyglucose-Resistant Mutant of Saccharomyces cerevisiae Shows Enhanced Maltose Fermentative Ability by the Activation of MAL Genes
Yoshitake Orikasa, Dai Mikumo, Takuji Ohwada
Foods. 2018 Apr; 7(4): 52. Published online 2018 Apr 1. doi: 10.3390/foods7040052
PMCID:
PMC5920417
AbstractArticlePDF–965K
9.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
10.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
11.
Multilevel regulation of an α-arrestin by glucose depletion controls hexose transporter endocytosis
Junie Hovsepian, Quentin Defenouillère, Véronique Albanèse, Libuše Váchová, Camille Garcia, Zdena Palková, Sébastien Léon
J Cell Biol. 2017 Jun 5; 216(6): 1811–1831. doi: 10.1083/jcb.201610094
PMCID:
PMC5461024
AbstractArticlePDF–3.1M
12.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M
13.
The glucose metabolite methylglyoxal inhibits expression of the glucose transporter genes by inactivating the cell surface glucose sensors Rgt2 and Snf3 in yeast
Adhiraj Roy, Salman Hashmi, Zerui Li, Angela D. Dement, Kyu Hong Cho, Jeong-Ho Kim
Mol Biol Cell. 2016 Mar 1; 27(5): 862–871. doi: 10.1091/mbc.E15-11-0789
Correction in:
Mol Biol Cell. 2016 Oct 15; 27(20): 3178–3179.
PMCID:
PMC4803311
AbstractArticlePDF–1.4M
14.
Protein-RNA networks revealed through covalent RNA marks
Christopher P. Lapointe, Daniel Wilinski, Harriet A. J. Saunders, Marvin Wickens
Nat Methods. Author manuscript; available in PMC 2016 May 18.
Published in final edited form as: Nat Methods. 2015 Dec; 12(12): 1163–1170. Published online 2015 Nov 2. doi: 10.1038/nmeth.3651
PMCID:
PMC4707952
AbstractArticlePDF–856K
15.
Target selection by natural and redesigned PUF proteins
Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens
Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112
PMCID:
PMC4703012
AbstractArticlePDF–1.3M
16.
Improvement of Glucose Uptake Rate and Production of Target Chemicals by Overexpressing Hexose Transporters and Transcriptional Activator Gcr1 in Saccharomyces cerevisiae
Daehee Kim, Ji-Yoon Song, Ji-Sook Hahn
Appl Environ Microbiol. 2015 Dec; 81(24): 8392–8401. Prepublished online 2015 Oct 2. Published online 2015 Nov 13. doi: 10.1128/AEM.02056-15
PMCID:
PMC4644637
AbstractArticlePDF–362K
17.
Saccharomyces cerevisiae–Based Platform for Rapid Production and Evaluation of Eukaryotic Nutrient Transporters and Transceptors for Biochemical Studies and Crystallography
Peter Scharff-Poulsen, Per Amstrup Pedersen
PLoS One. 2013; 8(10): e76851. Published online 2013 Oct 4. doi: 10.1371/journal.pone.0076851
PMCID:
PMC3790737
AbstractArticlePDF–1.7M
18.
Engineering Yeast Hexokinase 2 for Improved Tolerance Toward Xylose-Induced Inactivation
Basti Bergdahl, Anders G. Sandström, Celina Borgström, Tarinee Boonyawan, Ed W. J. van Niel, Marie F. Gorwa-Grauslund
PLoS One. 2013; 8(9): e75055. Published online 2013 Sep 6. doi: 10.1371/journal.pone.0075055
PMCID:
PMC3765440
AbstractArticlePDF–1.0M
19.
Impact of assimilable nitrogen availability in glucose uptake kinetics in Saccharomyces cerevisiae during alcoholic fermentation
Margarida Palma, Sara Cordeiro Madeira, Ana Mendes-Ferreira, Isabel Sá-Correia
Microb Cell Fact. 2012; 11: 99. Published online 2012 Jul 30. doi: 10.1186/1475-2859-11-99
PMCID:
PMC3503800
AbstractArticlePDF–756K
20.
Uptake of radiolabeled GlcNAc into Saccharomyces cerevisiae via native hexose transporters and its in vivo incorporation into GPI precursors in cells expressing heterologous GlcNAc kinase
John J Scarcelli, Paul A Colussi, Anne-Lise Fabre, Eckhard Boles, Peter Orlean, Christopher H Taron
FEMS Yeast Res. 2012 May; 12(3): 305–316. Published online 2012 Jan 18. doi: 10.1111/j.1567-1364.2011.00778.x
PMCID:
PMC3498731
AbstractArticlePDF–659K

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