PMC Links for GEO Profiles (Select 82345775) - PMC

Select item 108106871.

Association of Pharmacogenetic Markers With Atazanavir Exposure in HIV-Infected Women

Bani Tamraz, Yong Huang, Audrey L. French, Seble Kassaye, Kathryn Anastos, Marek J. Nowicki, Stephen Gange, Deborah R. Gustafson, Peter Bacchetti, Ruth M. Greenblatt, Pirro G. Hysi, Bradley E. Aouizerat, Women’s Interagency HIV Study

Clin Pharmacol Ther. Author manuscript; available in PMC 2024 Jan 25.

Published in final edited form as: Clin Pharmacol Ther. 2020 Feb; 107(2): 315–318. Published online 2019 Sep 28. doi: 10.1002/cpt.1605

PMCID:: PMC10810687

Abstract Article PDF–85K

Select item 104632582.

Alternative splicing regulates adaptor protein binding, trafficking, and activity of the Vps10p domain receptor SorCS2 in neuronal development

Sune Skeldal, Lasse Frank Voss, Jonas Lende, Sarah Broholt Pedersen, Simon Mølgaard, Mathias Kaas, Perline Demange, Andreas Høiberg Bentsen, Marie Fuglsang, Marie Rubin Sander, Henriette Buttenschøn, Camilla Gustafsen, Peder Madsen, Simon Glerup

J Biol Chem. 2023 Sep; 299(9): 105102. Published online 2023 Jul 26. doi: 10.1016/j.jbc.2023.105102

PMCID:: PMC10463258

Abstract Article PDF–3.4M

Select item 98130743.

Loss of SORCS2 is Associated with Neuronal DNA Double-Strand Breaks

Katerina O. Gospodinova, Ditte Olsen, Mathias Kaas, Susan M. Anderson, Jonathan Phillips, Rosie M. Walker, Mairead L. Bermingham, Abigail L. Payne, Panagiotis Giannopoulos, Divya Pandya, Tara L. Spires-Jones, Catherine M. Abbott, David J. Porteous, Simon Glerup, Kathryn L. Evans

Cell Mol Neurobiol. 2023; 43(1): 237–249. Published online 2021 Nov 6. doi: 10.1007/s10571-021-01163-7

PMCID:: PMC9813074

Abstract Article PDF–1.7M

Select item 81650304.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 67781375.

The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis

Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca, Liviu Copoiu, Anton J. Enright, Giuliano Callaini, Maria Giovanna Riparbelli, Lu Yu, Jyoti S. Choudhary, Enrico Ferrero, Sally Wheatley, Max E. Douglas, Masanori Mishima, Pier Paolo D’Avino

Nat Commun. 2019; 10: 4513. Published online 2019 Oct 4. doi: 10.1038/s41467-019-12507-9

PMCID:: PMC6778137

Abstract Article PDF–7.8M

Select item 64104986.

SorCS2 Controls Functional Expression of Amino Acid Transporter EAAT3 and Protects Neurons from Oxidative Stress and Epilepsy-Induced Pathology

Anna R. Malik, Kinga Szydlowska, Karolina Nizinska, Antonino Asaro, Erwin A. van Vliet, Oliver Popp, Gunnar Dittmar, Raphaela Fritsche-Guenther, Jennifer A. Kirwan, Anders Nykjaer, Katarzyna Lukasiuk, Eleonora Aronica, Thomas E. Willnow

Cell Rep. 2019 Mar 5; 26(10): 2792–2804.e6. Published online 2019 Mar 5. doi: 10.1016/j.celrep.2019.02.027

PMCID:: PMC6410498

Abstract Article

Select item 63178717.

Risk locus identification ties alcohol withdrawal symptoms to SORCS2

Andrew H. Smith, Peter L. Ovesen, Sune Skeldal, Seungeun Yeo, Kevin P. Jensen, Ditte Olsen, Nancy Diazgranados, Hongyu Zhao, Lindsay A. Farrer, David Goldman, Simon Glerup, Henry R. Kranzler, Anders Nykjær, Joel Gelernter

Alcohol Clin Exp Res. Author manuscript; available in PMC 2019 Dec 1.

Published in final edited form as: Alcohol Clin Exp Res. 2018 Dec; 42(12): 2337–2348. Published online 2018 Oct 25. doi: 10.1111/acer.13890

PMCID:: PMC6317871

Abstract Article PDF–843K

Select item 61666828.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 60376219.

A genome-wide association study identifies a candidate gene associated with atazanavir exposure measured in hair

Clin Pharmacol Ther. Author manuscript; available in PMC 2019 Nov 1.

Published in final edited form as: Clin Pharmacol Ther. 2018 Nov; 104(5): 949–956. Published online 2018 Feb 8. doi: 10.1002/cpt.1014

PMCID:: PMC6037621

Abstract Article PDF–725K

Select item 567858110.

RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Nila Roy Choudhury, Gregory Heikel, Maryia Trubitsyna, Peter Kubik, Jakub Stanislaw Nowak, Shaun Webb, Sander Granneman, Christos Spanos, Juri Rappsilber, Alfredo Castello, Gracjan Michlewski

BMC Biol. 2017; 15: 105. Published online 2017 Nov 8. doi: 10.1186/s12915-017-0444-9

PMCID:: PMC5678581

Abstract Article PDF–3.2M

Select item 373359511.

Genetics of coronary artery calcification among African Americans, a meta-analysis

Mary K Wojczynski, Mingyao Li, Lawrence F Bielak, Kathleen F Kerr, Alex P Reiner, Nathan D Wong, Lisa R Yanek, Liming Qu, Charles C White, Leslie A Lange, Jane F Ferguson, Jing He, Taylor Young, Thomas H Mosley, Jennifer A Smith, Brian G Kral, Xiuqing Guo, Quenna Wong, Santhi K Ganesh, Susan R Heckbert, Michael E Griswold, Daniel H O’Leary, Matthew Budoff, J Jeffrey Carr, Herman A Taylor,, Jr., David A Bluemke, Serkalem Demissie, Shih-Jen Hwang, Dina N Paltoo, Joseph F Polak, Bruce M Psaty, Diane M Becker, Michael A Province, Wendy S Post, Christopher J O’Donnell, James G Wilson, Tamara B Harris, Maryam Kavousi, L Adrienne Cupples, Jerome I Rotter, Myriam Fornage, Lewis C Becker, Patricia A Peyser, Ingrid B Borecki, Muredach P Reilly

BMC Med Genet. 2013; 14: 75. Published online 2013 Jul 19. doi: 10.1186/1471-2350-14-75

PMCID:: PMC3733595

Abstract Article PDF–884K

Select item 352258712.

Novel Genetic Loci Identified for the Pathophysiology of Childhood Obesity in the Hispanic Population

Anthony G. Comuzzie, Shelley A. Cole, Sandra L. Laston, V. Saroja Voruganti, Karin Haack, Richard A. Gibbs, Nancy F. Butte

PLoS One. 2012; 7(12): e51954. Published online 2012 Dec 14. doi: 10.1371/journal.pone.0051954

PMCID:: PMC3522587

Abstract Article PDF–130K

Select item 317805913.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 304366414.

A genome-wide association study identifies novel loci associated with circulating IGF-I and IGFBP-3

Robert C. Kaplan, Ann-Kristin Petersen, Ming-Huei Chen, Alexander Teumer, Nicole L. Glazer, Angela Döring, Carolyn S.P. Lam, Nele Friedrich, Anne Newman, Martina Müller, Qiong Yang, Georg Homuth, Anne Cappola, Norman Klopp, Holly Smith, Florian Ernst, Bruce M. Psaty, H.-Erich Wichmann, Douglas B. Sawyer, Reiner Biffar, Jerome I. Rotter, Christian Gieger, Lisa S. Sullivan, Henry Völzke, Kenneth Rice, Ariadni Spyroglou, Heyo K. Kroemer, Y.-D. Ida Chen, Jenny Manolopoulou, Matthias Nauck, Howard D. Strickler, Mark O. Goodarzi, Martin Reincke, Michael N. Pollak, Martin Bidlingmaier, Ramachandran S. Vasan, Henri Wallaschofski

Hum Mol Genet. 2011 Mar 15; 20(6): 1241–1251. Published online 2011 Jan 7. doi: 10.1093/hmg/ddq560

PMCID:: PMC3043664

Abstract Article PDF–423K

Select item 289646415.

Personalized Smoking Cessation: Interactions between Nicotine Dose, Dependence and Quit-Success Genotype Score

Jed E Rose, Frédérique M Behm, Tomas Drgon, Catherine Johnson, George R Uhl

Mol Med. 2010 Jul-Aug; 16(7-8): 247–253. Published online 2010 Mar 17. doi: 10.2119/molmed.2009.00159

Correction in:: Mol Med. 2012; 18(1): 729.

PMCID:: PMC2896464

Abstract Article PDF–2.4M

Select item 283669816.

Inherited genetic variant predisposes to aggressive but not indolent prostate cancer

Jianfeng Xu, Siqun Lilly Zheng, Sarah D. Isaacs, Kathleen E. Wiley, Fredrik Wiklund, Jielin Sun, A. Karim Kader, Ge Li, Lina D. Purcell, Seong-Tae Kim, Fang-Chi Hsu, Pär Stattin, Jonas Hugosson, Jan Adolfsson, Patrick C. Walsh, Jeffrey M. Trent, David Duggan, John Carpten, Henrik Grönberg, William B. Isaacs

Proc Natl Acad Sci U S A. 2010 Feb 2; 107(5): 2136–2140. Published online 2010 Jan 11. doi: 10.1073/pnas.0914061107

PMCID:: PMC2836698

Abstract Article PDF–260K

Select item 269440617.

Findings from bipolar disorder genome-wide association studies replicate in a Finnish bipolar family-cohort

HM Ollila, P Soronen, K Silander, OM Palo, T Kieseppä, MA Kaunisto, J Lönnqvist, L Peltonen, T Partonen, T Paunio

Mol Psychiatry. Author manuscript; available in PMC 2009 Oct 1.

Published in final edited form as: Mol Psychiatry. 2009 Apr; 14(4): 351–353. doi: 10.1038/mp.2008.122

PMCID:: PMC2694406

Article PDF–262K

Select item 135612918.

Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes

Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano

Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406

PMCID:: PMC1356129

Abstract Article PDF–438K

Select item 13924119.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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