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Items: 17

1.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
2.
Malignant Transformation Involving CXXC4 Mutations Identified in a Leukemic Progression Model of Severe Congenital Neutropenia
Patricia A. Olofsen, Szabolcs Fatrai, Paulina M.H. van Strien, Julia C. Obenauer, Hans W.J. de Looper, Remco M. Hoogenboezem, Claudia A.J. Erpelinck-Verschueren, Michael P.W.M. Vermeulen, Onno Roovers, Torsten Haferlach, Joop H. Jansen, Mehrnaz Ghazvini, Eric M.J. Bindels, Rebekka K. Schneider, Emma M. de Pater, Ivo P. Touw
Cell Rep Med. 2020 Aug 25; 1(5): 100074. Published online 2020 Aug 25. doi: 10.1016/j.xcrm.2020.100074
PMCID:
PMC7659587
AbstractArticlePDF–4.3M
3.
BCAR1 promotes proliferation and cell growth in lung adenocarcinoma via upregulation of POLR2A
Chun‐guo Mao, Sha‐sha Jiang, Cheng Shen, Tan Long, Hua Jin, Qun‐You Tan, Bo Deng
Thorac Cancer. 2020 Nov; 11(11): 3326–3336. Published online 2020 Oct 1. doi: 10.1111/1759-7714.13676
PMCID:
PMC7606008
AbstractArticlePDF–2.5M
4.
LUCAT1 Epigenetically Downregulates the Tumor Suppressor Genes CXXC4 and SFRP2 in Gastric Cancer
Hyo Joo Byun, Jung-Ho Yoon, Sang Kil Lee
Yonsei Med J. 2020 Nov 1; 61(11): 923–934. Published online 2020 Oct 22. doi: 10.3349/ymj.2020.61.11.923
Correction in:
Yonsei Med J. 2021 Apr 1; 62(4): 378.
PMCID:
PMC7593101
AbstractArticlePDF–2.2M
5.
CXXC finger protein 4 inhibits the CDK18‐ERK1/2 axis to suppress the immune escape of gastric cancer cells with involvement of ELK1/MIR100HG pathway
Ping Li, Dongfang Ge, Pengfei Li, Fangyong Hu, Junfeng Chu, Xiaojun Chen, Wenbo Song, Ali Wang, Guangyu Tian, Xiang Gu
J Cell Mol Med. 2020 Sep; 24(17): 10151–10165. Published online 2020 Jul 26. doi: 10.1111/jcmm.15625
PMCID:
PMC7520267
AbstractArticlePDF–1.4M
6.
The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei
Giovanni Nassa, Giorgio Giurato, Annamaria Salvati, Valerio Gigantino, Giovanni Pecoraro, Jessica Lamberti, Francesca Rizzo, Tuula A. Nyman, Roberta Tarallo, Alessandro Weisz
Sci Data. 2019; 6: 173. Published online 2019 Sep 16. doi: 10.1038/s41597-019-0179-2
PMCID:
PMC6746822
AbstractArticlePDF–2.0M
7.
MiR-629-5p promotes colorectal cancer progression through targetting CXXC finger protein 4
Jinlai Lu, Shuirong Lu, Jingze Li, Qi Yu, Lang Liu, Qin Li
Biosci Rep. 2018 Aug 31; 38(4): BSR20180613. Prepublished online 2018 Jul 24. Published online 2018 Aug 29. doi: 10.1042/BSR20180613
PMCID:
PMC6131209
AbstractArticlePDF–1.1M
8.
Enhancer of zeste homolog 2 activates wnt signaling through downregulating CXXC finger protein 4
H Lu, J Sun, F Wang, L Feng, Y Ma, Q Shen, Z Jiang, X Sun, X Wang, H Jin
Cell Death Dis. 2013 Aug; 4(8): e776. Published online 2013 Aug 15. doi: 10.1038/cddis.2013.293
PMCID:
PMC3763454
AbstractArticlePDF–2.2M
9.
Modulation of TET2 expression and 5-methylcytosine oxidation by the CXXC domain protein IDAX
Myunggon Ko, Jungeun An, Hozefa S. Bandukwala, Lukas Chavez, Tarmo Äijö, William A. Pastor, Matthew F. Segal, Huiming Li, Kian Peng Koh, Harri Lähdesmäki, Patrick G. Hogan, L. Aravind, Anjana Rao
Nature. Author manuscript; available in PMC 2014 May 2.
Published in final edited form as: Nature. 2013 May 2; 497(7447): 122–126. Published online 2013 Apr 7. doi: 10.1038/nature12052
PMCID:
PMC3643997
AbstractArticlePDF–1.5M
10.
Interactions of Pathological Hallmark Proteins: TUBULIN POLYMERIZATION PROMOTING PROTEIN/p25, β-AMYLOID, AND α-SYNUCLEIN
Judit Oláh, Orsolya Vincze, Dezső Virók, Dóra Simon, Zsolt Bozsó, Natália Tőkési, István Horváth, Emma Hlavanda, János Kovács, Anna Magyar, Mária Szűcs, Ferenc Orosz, Botond Penke, Judit Ovádi
J Biol Chem. 2011 Sep 30; 286(39): 34088–34100. Published online 2011 Aug 8. doi: 10.1074/jbc.M111.243907
PMCID:
PMC3190826
AbstractArticlePDF–5.7M
11.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
12.
Identification of FBXO25-interacting Proteins Using an Integrated Proteomics Approach
Felipe R. Teixeira, Sami Yokoo, Carlos G. Gartner, Adriana O. Manfiolli, Munira M. A. Baqui, Eliana M. Assmann, Ana Leticia G. C. Maragno, Huijun Yu, Primal de Lanerolle, Jörg Kobarg, Steven P. Gygi, Marcelo D. Gomes
Proteomics. Author manuscript; available in PMC 2011 Aug 1.
Published in final edited form as: Proteomics. 2010 Aug; 10(15): 2746–2757. doi: 10.1002/pmic.200900419
PMCID:
PMC3034404
AbstractArticlePDF–1.8M
13.
A systematic gene-based screen of chr4q22–q32 identifies association of a novel susceptibility gene, DKK2, with the quantitative trait of alcohol dependence symptom counts
Gursharan Kalsi, Po-Hsiu Kuo, Fazil Aliev, Jeffry Alexander, Omari McMichael, Diana G. Patterson, Dermot Walsh, Zhongming Zhao, Marc Schuckit, John Nurnberger, Jr, Howard Edenberg, John Kramer, Vladimir Vladimirov, Carol A. Prescott, Danielle M. Dick, Kenneth S. Kendler, Brien P. Riley
Hum Mol Genet. 2010 Jun 15; 19(12): 2497–2506. Published online 2010 Mar 23. doi: 10.1093/hmg/ddq112
Correction in:
Hum Mol Genet. 2010 Oct 15; 19(20): 4121.
PMCID:
PMC2876884
AbstractArticlePDF–226K
14.
A Genome-wide Short Hairpin RNA Screening of Jurkat T-cells for Human Proteins Contributing to Productive HIV-1 Replication
Man Lung Yeung, Laurent Houzet, Venkat S. R. K. Yedavalli, Kuan-Teh Jeang
J Biol Chem. 2009 Jul 17; 284(29): 19463–19473. Published online 2009 May 20. doi: 10.1074/jbc.M109.010033
PMCID:
PMC2740572
AbstractArticlePDF–2.5M
15.
Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes
Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano
Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406
PMCID:
PMC1356129
AbstractArticlePDF–438K
16.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
17.
Inhibition of the Wnt Signaling Pathway by Idax, a Novel Dvl-Binding Protein
Shin-ichiro Hino, Shosei Kishida, Tatsuo Michiue, Akimasa Fukui, Ikuo Sakamoto, Shinji Takada, Makoto Asashima, Akira Kikuchi
Mol Cell Biol. 2001 Jan; 21(1): 330–342. doi: 10.1128/MCB.21.1.330-342.2001
PMCID:
PMC88806
AbstractArticlePDF–5.2M

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