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Select item 105658761.

Pulse-SILAC and Interactomics Reveal Distinct DDB1-CUL4–Associated Factors, Cellular Functions, and Protein Substrates

Jennifer Raisch, Marie-Line Dubois, Marika Groleau, Dominique Lévesque, Thomas Burger, Carla-Marie Jurkovic, Romain Brailly, Gwendoline Marbach, Alyson McKenna, Catherine Barrette, Pierre-Étienne Jacques, François-Michel Boisvert

Mol Cell Proteomics. 2023 Oct; 22(10): 100644. Published online 2023 Sep 7. doi: 10.1016/j.mcpro.2023.100644

PMCID:: PMC10565876

Abstract Article PDF–3.7M

Select item 97080862.

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers

Martina Oravcová, Minghua Nie, Nicola Zilio, Shintaro Maeda, Yasaman Jami-Alahmadi, Eros Lazzerini-Denchi, James A Wohlschlegel, Helle D Ulrich, Takanori Otomo, Michael N Boddy

eLife. 2022; 11: e79676. Published online 2022 Nov 14. doi: 10.7554/eLife.79676

PMCID:: PMC9708086

Abstract Article PDF–8.5M

Select item 95403453.

The in vivo Interaction Landscape of Histones H3.1 and H3.3

Robert Siddaway, Scott Milos, Étienne Coyaud, Hwa Young Yun, Shahir M. Morcos, Sanja Pajovic, Eric I. Campos, Brian Raught, Cynthia Hawkins

Mol Cell Proteomics. 2022 Oct; 21(10): 100411. Published online 2022 Sep 9. doi: 10.1016/j.mcpro.2022.100411

PMCID:: PMC9540345

Abstract Article PDF–3.9M

Select item 94634434.

Structural insights into human CCAN complex assembled onto DNA

Tian Tian, Lili Chen, Zhen Dou, Zhisen Yang, Xinjiao Gao, Xiao Yuan, Chengliang Wang, Ran Liu, Zuojun Shen, Ping Gui, Maikun Teng, Xianlei Meng, Donald L. Hill, Lin Li, Xuan Zhang, Xing Liu, Linfeng Sun, Jianye Zang, Xuebiao Yao

Cell Discov. 2022; 8: 90. Published online 2022 Sep 9. doi: 10.1038/s41421-022-00439-6

PMCID:: PMC9463443

Abstract Article PDF–5.7M

Select item 83529645.

Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer

Athea Vichas, Amanda K. Riley, Naomi T. Nkinsi, Shriya Kamlapurkar, Phoebe C. R. Parrish, April Lo, Fujiko Duke, Jennifer Chen, Iris Fung, Jacqueline Watson, Matthew Rees, Austin M. Gabel, James D. Thomas, Robert K. Bradley, John K. Lee, Emily M. Hatch, Marina K. Baine, Natasha Rekhtman, Marc Ladanyi, Federica Piccioni, Alice H. Berger

Nat Commun. 2021; 12: 4789. Published online 2021 Aug 9. doi: 10.1038/s41467-021-24841-y

PMCID:: PMC8352964

Abstract Article PDF–4.5M

Select item 81650306.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 73220677.

RIG-I regulates myeloid differentiation by promoting TRIM25-mediated ISGylation

Song-Fang Wu, Li Xia, Xiao-Dong Shi, Yu-Jun Dai, Wei-Na Zhang, Jun-Mei Zhao, Wu Zhang, Xiang-Qin Weng, Jing Lu, Huang-Ying Le, Sheng-ce Tao, Jiang Zhu, Zhu Chen, Yue-Ying Wang, Saijuan Chen

Proc Natl Acad Sci U S A. 2020 Jun 23; 117(25): 14395–14404. Published online 2020 Jun 8. doi: 10.1073/pnas.1918596117

PMCID:: PMC7322067

Abstract Article PDF–2.7M

Select item 63757298.

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains

Jean-Philippe Lambert, Sarah Picaud, Takao Fujisawa, Huayun Hou, Pavel Savitsky, Liis Uusküla-Reimand, Gagan D. Gupta, Hala Abdouni, Zhen-Yuan Lin, Monika Tucholska, James D.R. Knight, Beatriz Gonzalez-Badillo, Nicole St-Denis, Joseph A. Newman, Manuel Stucki, Laurence Pelletier, Nuno Bandeira, Michael D. Wilson, Panagis Filippakopoulos, Anne-Claude Gingras

Mol Cell. 2019 Feb 7; 73(3): 621–638.e17. doi: 10.1016/j.molcel.2018.11.006

PMCID:: PMC6375729

Abstract Article PDF–10M

Select item 63413909.

Holliday junction recognition protein interacts with and specifies the centromeric assembly of CENP-T

Mingrui Ding, Jiying Jiang, Fengrui Yang, Fan Zheng, Jingwen Fang, Qian Wang, Jianyu Wang, William Yao, Xu Liu, Xinjiao Gao, McKay Mullen, Ping He, Cathy Rono, Xia Ding, Jingjun Hong, Chuanhai Fu, Xing Liu, Xuebiao Yao

J Biol Chem. 2019 Jan 18; 294(3): 968–980. Published online 2018 Nov 20. doi: 10.1074/jbc.RA118.004688

PMCID:: PMC6341390

Abstract Article PDF–3.5M

Select item 572485610.

A defect in the inner kinetochore protein CENPT causes a new syndrome of severe growth failure

Christina Y. Hung, Barbara Volkmar, James D. Baker, Johann W. Bauer, Emanuela Gussoni, Stefan Hainzl, Alfred Klausegger, Jose Lorenzo, Ivana Mihalek, Olaf Rittinger, Mustafa Tekin, Julia E. Dallman, Olaf A. Bodamer

PLoS One. 2017; 12(12): e0189324. Published online 2017 Dec 11. doi: 10.1371/journal.pone.0189324

PMCID:: PMC5724856

Abstract Article PDF–26M

Select item 567858111.

RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Nila Roy Choudhury, Gregory Heikel, Maryia Trubitsyna, Peter Kubik, Jakub Stanislaw Nowak, Shaun Webb, Sander Granneman, Christos Spanos, Juri Rappsilber, Alfredo Castello, Gracjan Michlewski

BMC Biol. 2017; 15: 105. Published online 2017 Nov 8. doi: 10.1186/s12915-017-0444-9

PMCID:: PMC5678581

Abstract Article PDF–3.2M

Select item 563060012.

Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism

Giulia Antoniali, Fabrizio Serra, Lisa Lirussi, Mikiei Tanaka, Chiara D’Ambrosio, Shiheng Zhang, Slobodanka Radovic, Emiliano Dalla, Yari Ciani, Andrea Scaloni, Mengxia Li, Silvano Piazza, Gianluca Tell

Nat Commun. 2017; 8: 797. Published online 2017 Oct 6. doi: 10.1038/s41467-017-00842-8

PMCID:: PMC5630600

Abstract Article PDF–2.3M

Select item 553161113.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 533844614.

Integrity of the human centromere DNA repeats is protected by CENP-A, CENP-C, and CENP-T

Simona Giunta, Hironori Funabiki

Proc Natl Acad Sci U S A. 2017 Feb 21; 114(8): 1928–1933. Published online 2017 Feb 6. doi: 10.1073/pnas.1615133114

PMCID:: PMC5338446

Abstract Article PDF–1.4M

Select item 524112015.

Molecular basis of outer kinetochore assembly on CENP-T

Pim J Huis in 't Veld, Sadasivam Jeganathan, Arsen Petrovic, Priyanka Singh, Juliane John, Veronica Krenn, Florian Weissmann, Tanja Bange, Andrea Musacchio

eLife. 2016; 5: e21007. Published online 2016 Dec 24. doi: 10.7554/eLife.21007

PMCID:: PMC5241120

Abstract Article PDF–8.7M

Select item 505203416.

CENPT bridges adjacent CENPA nucleosomes on young human α-satellite dimers

Jitendra Thakur, Steven Henikoff

Genome Res. 2016 Sep; 26(9): 1178–1187. doi: 10.1101/gr.204784.116

PMCID:: PMC5052034

Abstract Article PDF–1.1M

Select item 491193017.

The CENP-T/-W complex is a binding partner of the histone chaperone FACT

Lisa Prendergast, Sebastian Müller, Yiwei Liu, Hongda Huang, Florent Dingli, Damarys Loew, Isabelle Vassias, Dinshaw J. Patel, Kevin F. Sullivan, Geneviève Almouzni

Genes Dev. 2016 Jun 1; 30(11): 1313–1326. doi: 10.1101/gad.275073.115

PMCID:: PMC4911930

Abstract Article PDF–1.3M

Select item 439450918.

The CENP-T C-Terminus Is Exclusively Proximal to H3.1 and not to H3.2 or H3.3

Christian Abendroth, Antje Hofmeister, Sandra B. Hake, Paul K. Kamweru, Elke Miess, Carsten Dornblut, Isabell Küffner, Wen Deng, Heinrich Leonhardt, Sandra Orthaus, Christian Hoischen, Stephan Diekmann

Int J Mol Sci. 2015 Mar; 16(3): 5839–5863. Published online 2015 Mar 12. doi: 10.3390/ijms16035839

PMCID:: PMC4394509

Abstract Article PDF–2.2M

Select item 438371319.

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes

Jean-Philippe Lambert, Monika Tucholska, Christopher Go, James D.R. Knight, Anne-Claude Gingras

J Proteomics. Author manuscript; available in PMC 2016 Apr 6.

Published in final edited form as: J Proteomics. 2015 Apr 6; 118: 81–94. Published online 2014 Oct 2. doi: 10.1016/j.jprot.2014.09.011

PMCID:: PMC4383713

Abstract Article PDF–1.4M

Select item 434814620.

Distinct organization and regulation of the outer kinetochore KMN network downstream of CENP-C and CENP-T

Florencia Rago, Karen E. Gascoigne, Iain M. Cheeseman

Curr Biol. Author manuscript; available in PMC 2016 Mar 2.

Published in final edited form as: Curr Biol. 2015 Mar 2; 25(5): 671–677. Published online 2015 Feb 5. doi: 10.1016/j.cub.2015.01.059

PMCID:: PMC4348146

Abstract Article PDF–1.3M

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