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Items: 1 to 20 of 130

1.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
2.
Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking
Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan
J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047
PMCID:
PMC10798858
AbstractArticlePDF–6.4M
3.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
4.
A novel ubiquitin–proteasome system regulation of Sgf73/ataxin-7 that maintains the integrity of the coactivator SAGA in orchestrating transcription
Priyanka Barman, Amala Kaja, Pritam Chakraborty, Shalini Guha, Arpan Roy, Jannatul Ferdoush, Sukesh R Bhaumik
Genetics. 2023 Jul; 224(3): iyad071. Published online 2023 Apr 19. doi: 10.1093/genetics/iyad071
PMCID:
PMC10324951
AbstractArticlePDF–1.5M
5.
The SAGA HAT module is tethered by its SWIRM domain and modulates activity of the SAGA DUB module
Sara T. Haile, Sanim Rahman, James K. Fields, Benjamin C. Orsburn, Namandjé N. Bumpus, Cynthia Wolberger
Biochim Biophys Acta Gene Regul Mech. Author manuscript; available in PMC 2023 Jun 1.
Published in final edited form as: Biochim Biophys Acta Gene Regul Mech. 2023 Jun; 1866(2): 194929. Published online 2023 Mar 24. doi: 10.1016/j.bbagrm.2023.194929
PMCID:
PMC10226619
AbstractArticlePDF–1.8M
6.
SWR1 chromatin remodeling complex prevents mitotic slippage during spindle position checkpoint arrest
Ayse Koca Caydasi, Anton Khmelinskii, Zoulfia Darieva, Bahtiyar Kurtulmus, Michael Knop, Gislene Pereira
Mol Biol Cell. 2023 Feb 1; 34(2): ar11. Published online 2023 Jan 13. doi: 10.1091/mbc.E20-03-0179
PMCID:
PMC9930528
AbstractArticlePDF–8.4M
7.
Suppressor mutations that make the essential transcription factor Spn1/Iws1 dispensable in Saccharomyces cerevisiae
Francheska López-Rivera, James Chuang, Dan Spatt, Rajaraman Gopalakrishnan, Fred Winston
Genetics. 2022 Oct; 222(2): iyac125. Published online 2022 Aug 17. doi: 10.1093/genetics/iyac125
PMCID:
PMC9526074
AbstractArticlePDF–1.0M
8.
Conformational landscape of the yeast SAGA complex as revealed by cryo-EM
Diana Vasyliuk, Joeseph Felt, Ellen D. Zhong, Bonnie Berger, Joseph H. Davis, Calvin K. Yip
Sci Rep. 2022; 12: 12306. Published online 2022 Jul 19. doi: 10.1038/s41598-022-16391-0
PMCID:
PMC9296673
AbstractArticlePDF–3.9M
9.
Sus1 maintains a normal lifespan through regulation of TREX-2 complex-mediated mRNA export
Suji Lim, Yan Liu, Byung-Ho Rhie, Chun Kim, Hong-Yeoul Ryu, Seong Hoon Ahn
Aging (Albany NY) 2022 Jun 30; 14(12): 4990–5012. Published online 2022 Jun 29. doi: 10.18632/aging.204146
PMCID:
PMC9271307
AbstractArticlePDF–2.2M
10.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
11.
SAGA and SAGA-like SLIK transcriptional coactivators are structurally and biochemically equivalent
Klaudia Adamus, Cyril Reboul, Jarrod Voss, Cheng Huang, Ralf B. Schittenhelm, Sarah N. Le, Andrew M. Ellisdon, Hans Elmlund, Marion Boudes, Dominika Elmlund
J Biol Chem. 2021 Jan-Jun; 296: 100671. Published online 2021 Apr 15. doi: 10.1016/j.jbc.2021.100671
PMCID:
PMC8131915
AbstractArticlePDF–2.0M
12.
A high-resolution protein architecture of the budding yeast genome
Matthew J. Rossi, Prashant K. Kuntala, William K.M. Lai, Naomi Yamada, Nitika Badjatia, Chitvan Mittal, Guray Kuzu, Kylie Bocklund, Nina P. Farrell, Thomas R. Blanda, Joshua D. Mairose, Ann V. Basting, Katelyn S. Mistretta, David J. Rocco, Emily S. Perkinson, Gretta D. Kellogg, Shaun Mahony, B. Franklin Pugh
Nature. Author manuscript; available in PMC 2021 Sep 10.
Published in final edited form as: Nature. 2021 Apr; 592(7853): 309–314. Published online 2021 Mar 10. doi: 10.1038/s41586-021-03314-8
PMCID:
PMC8035251
AbstractArticlePDF–7.8M
13.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
14.
SAGA–CORE subunit Spt7 is required for correct Ubp8 localization, chromatin association and deubiquitinase activity
Carme Nuño-Cabanes, Varinia García-Molinero, Manuel Martín-Expósito, María-Eugenia Gas, Paula Oliete-Calvo, Encar García-Oliver, María de la Iglesia-Vayá, Susana Rodríguez-Navarro
Epigenetics Chromatin. 2020; 13: 46. Published online 2020 Oct 28. doi: 10.1186/s13072-020-00367-3
PMCID:
PMC7594455
AbstractArticlePDF–1.9M
15.
Chaperone-Mediated Protein Disaggregation Triggers Proteolytic Clearance of Intra-nuclear Protein Inclusions
Fabian den Brave, Lucas V. Cairo, Chandhuru Jagadeesan, Carmen Ruger-Herreros, Axel Mogk, Bernd Bukau, Stefan Jentsch
Cell Rep. 2020 Jun 2; 31(9): 107680. Published online 2020 Jun 2. doi: 10.1016/j.celrep.2020.107680
PMCID:
PMC7273177
AbstractArticle
16.
Structure of transcription coactivator SAGA
Haibo Wang, Christian Dienemann, Alexandra Stützer, Henning Urlaub, Alan C.M. Cheung, Patrick Cramer
Nature. Author manuscript; available in PMC 2020 Jul 22.
Published in final edited form as: Nature. 2020 Jan; 577(7792): 717–720. Published online 2020 Jan 22. doi: 10.1038/s41586-020-1933-5
PMCID:
PMC6994259
AbstractArticlePDF–4.1M
17.
Mip6 binds directly to the Mex67 UBA domain to maintain low levels of Msn2/4 stress‐dependent mRNAs
Manuel Martín‐Expósito, Maria‐Eugenia Gas, Nada Mohamad, Carme Nuño‐Cabanes, Ana Tejada‐Colón, Pau Pascual‐García, Lorena de la Fuente, Belén Chaves‐Arquero, Jonathan Merran, Jeffry Corden, Ana Conesa, José Manuel Pérez‐Cañadillas, Jerónimo Bravo, Susana Rodríguez‐Navarro
EMBO Rep. 2019 Dec 5; 20(12): e47964. Published online 2019 Nov 3. doi: 10.15252/embr.201947964
PMCID:
PMC6893359
AbstractArticlePDF–5.5M
18.
Network Rewiring of Homologous Recombination Enzymes during Mitotic Proliferation and Meiosis
Philipp Wild, Aitor Susperregui, Ilaria Piazza, Christian Dörig, Ashwini Oke, Meret Arter, Miyuki Yamaguchi, Alexander T. Hilditch, Karla Vuina, Ki Choi Chan, Tatiana Gromova, James E. Haber, Jennifer C. Fung, Paola Picotti, Joao Matos
Mol Cell. 2019 Aug 22; 75(4): 859–874.e4. doi: 10.1016/j.molcel.2019.06.022
PMCID:
PMC6715774
AbstractArticle
19.
Tsr4 and Nap1, two novel members of the ribosomal protein chaperOME
Ingrid Rössler, Julia Embacher, Benjamin Pillet, Guillaume Murat, Laura Liesinger, Jutta Hafner, Julia Judith Unterluggauer, Ruth Birner-Gruenberger, Dieter Kressler, Brigitte Pertschy
Nucleic Acids Res. 2019 Jul 26; 47(13): 6984–7002. Published online 2019 May 7. doi: 10.1093/nar/gkz317
PMCID:
PMC6648895
AbstractArticlePDF–14M
20.
SAGA DUBm-mediated surveillance regulates prompt export of stress-inducible transcripts for proteostasis
Minhoo Kim, Yoonjung Choi, Harim Kim, Daeyoup Lee
Nat Commun. 2019; 10: 2458. Published online 2019 Jun 5. doi: 10.1038/s41467-019-10350-6
PMCID:
PMC6549176
AbstractArticlePDF–5.0M

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