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Select item 100729061.

Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity

Martin Golkowski, Andrea Lius, Tanmay Sapre, Ho-Tak Lau, Taylor Moreno, Dustin J. Maly, Shao-En Ong

Mol Cell. Author manuscript; available in PMC 2023 Apr 4.

Published in final edited form as: Mol Cell. 2023 Mar 2; 83(5): 803–818.e8. Published online 2023 Feb 2. doi: 10.1016/j.molcel.2023.01.015

PMCID:: PMC10072906

Abstract Article PDF–4.2M

Select item 91197362.

OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization

Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti

Science. Author manuscript; available in PMC 2022 Sep 11.

Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983

PMCID:: PMC9119736

Abstract Article PDF–3.3M

Select item 90405563.

A protein interaction landscape of breast cancer

Minkyu Kim, Jisoo Park, Mehdi Bouhaddou, Kyumin Kim, Ajda Rojc, Maya Modak, Margaret Soucheray, Michael J. McGregor, Patrick O’Leary, Denise Wolf, Erica Stevenson, Tzeh Keong Foo, Dominique Mitchell, Kari A. Herrington, Denise P. Muñoz, Beril Tutuncuoglu, Kuei-Ho Chen, Fan Zheng, Jason F. Kreisberg, Morgan E. Diolaiti, John D. Gordan, Jean-Philippe Coppé, Danielle L. Swaney, Bing Xia, Laura van ’t Veer, Alan Ashworth, Trey Ideker, Nevan Krogan

Science. Author manuscript; available in PMC 2022 Apr 26.

Published in final edited form as: Science. 2021 Oct; 374(6563): eabf3066. Published online 2021 Oct 1. doi: 10.1126/science.abf3066

PMCID:: PMC9040556

Abstract Article PDF–2.2M

Select item 88065884.

E2F transcription factor 1 (E2F1) promotes the transforming growth factor TGF-β1 induced human cardiac fibroblasts differentiation through promoting the transcription of CCNE2 gene

Rongheng Liao, Bo Xie, Jun Cui, Zhen Qi, Song Xue, Yongyi Wang

Bioengineered. 2021; 12(1): 6869–6877. Published online 2021 Sep 14. doi: 10.1080/21655979.2021.1972194

PMCID:: PMC8806588

Abstract Article PDF–1.8M

Select item 87972045.

Genome-wide chromatin contacts of super-enhancer-associated lncRNA identify LINC01013 as a regulator of fibrosis in the aortic valve

Arnaud Chignon, Déborah Argaud, Marie-Chloé Boulanger, Ghada Mkannez, Valentin Bon-Baret, Zhonglin Li, Sébastien Thériault, Yohan Bossé, Patrick Mathieu

PLoS Genet. 2022 Jan; 18(1): e1010010. Published online 2022 Jan 18. doi: 10.1371/journal.pgen.1010010

PMCID:: PMC8797204

Abstract Article PDF–2.9M

Select item 81650306.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 73460787.

CARM1 promotes non-small cell lung cancer progression through upregulating CCNE2 expression

Deqin Wu, Jing He, Wei Zhang, Kai Wang, Shidai Jin, Jun Li, Wen Gao

Aging (Albany NY) 2020 Jun 15; 12(11): 10578–10593. Published online 2020 Jun 2. doi: 10.18632/aging.103280

PMCID:: PMC7346078

Abstract Article PDF–2.1M

Select item 71713458.

Antibiotic tigecycline inhibits cell proliferation, migration and invasion via down‐regulating CCNE2 in pancreatic ductal adenocarcinoma

Jie Yang, Zhen Dong, Aishu Ren, Gang Fu, Kui Zhang, Changhong Li, Xiangwei Wang, Hongjuan Cui

J Cell Mol Med. 2020 Apr; 24(7): 4245–4260. Published online 2020 Mar 6. doi: 10.1111/jcmm.15086

PMCID:: PMC7171345

Abstract Article PDF–3.5M

Select item 69144089.

Circular RNA CircCCNB1 sponges micro RNA-449a to inhibit cellular senescence by targeting CCNE2

Ai Qing Yu, Zhi Xiao Wang, Wu Wu, Ke Yu Chen, Shi Rong Yan, Ze Bin Mao

Aging (Albany NY) 2019 Nov 30; 11(22): 10220–10241. Published online 2019 Nov 25. doi: 10.18632/aging.102449

PMCID:: PMC6914408

Abstract Article PDF–6.4M

Select item 677813710.

The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis

Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca, Liviu Copoiu, Anton J. Enright, Giuliano Callaini, Maria Giovanna Riparbelli, Lu Yu, Jyoti S. Choudhary, Enrico Ferrero, Sally Wheatley, Max E. Douglas, Masanori Mishima, Pier Paolo D’Avino

Nat Commun. 2019; 10: 4513. Published online 2019 Oct 4. doi: 10.1038/s41467-019-12507-9

PMCID:: PMC6778137

Abstract Article PDF–7.8M

Select item 671629611.

Motor Neuron and Pancreas Homeobox 1 (MNX1) Is Involved in Promoting Squamous Cervical Cancer Proliferation via Regulating Cyclin E

Li Xiao, Li Hong, Wenfei Zheng

Med Sci Monit. 2019; 25: 6304–6312. Published online 2019 Aug 22. doi: 10.12659/MSM.914233

PMCID:: PMC6716296

Abstract Article PDF–2.1M

Select item 628635312.

Cyclin A2/E1 activation defines a hepatocellular carcinoma subclass with a rearrangement signature of replication stress

Quentin Bayard, Léa Meunier, Camille Peneau, Victor Renault, Jayendra Shinde, Jean-Charles Nault, Iadh Mami, Gabrielle Couchy, Giuliana Amaddeo, Emmanuel Tubacher, Delphine Bacq, Vincent Meyer, Tiziana La Bella, Audrey Debaillon-Vesque, Paulette Bioulac-Sage, Olivier Seror, Jean-Frédéric Blanc, Julien Calderaro, Jean-François Deleuze, Sandrine Imbeaud, Jessica Zucman-Rossi, Eric Letouzé

Nat Commun. 2018; 9: 5235. Published online 2018 Dec 7. doi: 10.1038/s41467-018-07552-9

PMCID:: PMC6286353

Abstract Article PDF–2.2M

Select item 616668213.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 553161114.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 526459515.

The role of miR-26a and miR-30b in HER2+ breast cancer trastuzumab resistance and regulation of the CCNE2 gene

Eduardo Tormo, Anna Adam-Artigues, Sandra Ballester, Begoña Pineda, Sandra Zazo, Paula González-Alonso, Joan Albanell, Ana Rovira, Federico Rojo, Ana Lluch, Pilar Eroles

Sci Rep. 2017; 7: 41309. Published online 2017 Jan 25. doi: 10.1038/srep41309

PMCID:: PMC5264595

Abstract Article PDF–1.1M

Select item 526093916.

Gsk3β and Tomm20 are substrates of the SCFFbxo7/PARK15 ubiquitin ligase associated with Parkinson's disease

Felipe Roberti Teixeira, Suzanne J. Randle, Shachi P. Patel, Tycho E.T. Mevissen, Grasilda Zenkeviciute, Tie Koide, David Komander, Heike Laman

Biochem J. 2016 Oct 15; 473(20): 3563–3580. Prepublished online 2016 Aug 8. Published online 2016 Oct 11. doi: 10.1042/BCJ20160387

PMCID:: PMC5260939

Abstract Article PDF–1.1M

Select item 513501617.

Combinatorial PX-866 and Raloxifene Decrease Rb Phosphorylation, Cyclin E2 Transcription, and Proliferation of MCF-7 Breast Cancer Cells

Gregory W. Peek, Trygve O. Tollefsbol

J Cell Biochem. Author manuscript; available in PMC 2016 Dec 2.

Published in final edited form as: J Cell Biochem. 2016 Jul; 117(7): 1688–1696. Published online 2015 Dec 28. doi: 10.1002/jcb.25462

PMCID:: PMC5135016

Abstract Article PDF–1.4M

Select item 466247718.

A novel HMGA1-CCNE2-YAP axis regulates breast cancer aggressiveness

Silvia Pegoraro, Gloria Ros, Yari Ciani, Riccardo Sgarra, Silvano Piazza, Guidalberto Manfioletti

Oncotarget. 2015 Aug 7; 6(22): 19087–19101. Published online 2015 May 22. doi: 10.18632/oncotarget.4236

PMCID:: PMC4662477

Abstract Article PDF–2.8M

Select item 461721119.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 450638420.

Tumour-suppressive microRNA-144-5p directly targets CCNE1/2 as potential prognostic markers in bladder cancer

R Matsushita, N Seki, T Chiyomaru, S Inoguchi, T Ishihara, Y Goto, R Nishikawa, H Mataki, S Tatarano, T Itesako, M Nakagawa, H Enokida

Br J Cancer. 2015 Jul 14; 113(2): 282–289. Published online 2015 Jun 9. doi: 10.1038/bjc.2015.195

PMCID:: PMC4506384

Abstract Article PDF–1.3M

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PMC Links for GEO Profiles (Select 94662131) (39)
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qh82a01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1853448 3', mRNA se...
qh82a01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1853448 3', mRNA sequence
gi|3838896|gnl|dbEST|2016550|gb|AI2 .1|

Nucleotide
PREDICTED: Homo sapiens purinergic receptor P2X 3 (P2RX3), transcript variant X8...
PREDICTED: Homo sapiens purinergic receptor P2X 3 (P2RX3), transcript variant X8, mRNA
gi|2462525629|ref|XM_054368989.1|

Nucleotide

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