PMC Links for GEO Profiles (Select 98315142) - PMC

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Items: 18

Select item 81650301.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 76066742.

Differential processing and localization of human Nocturnin controls metabolism of mRNA and nicotinamide adenine dinucleotide cofactors

Elizabeth T. Abshire, Kelsey L. Hughes, Rucheng Diao, Sarah Pearce, Shreekara Gopalakrishna, Raymond C. Trievel, Joanna Rorbach, Peter L. Freddolino, Aaron C. Goldstrohm

J Biol Chem. 2020 Oct 30; 295(44): 15112–15133. Published online 2020 Aug 23. doi: 10.1074/jbc.RA120.012618

PMCID:: PMC7606674

Abstract Article PDF–4.3M

Select item 66993783.

NOCTURNIN Gene Diurnal Variation in Healthy Volunteers and Expression Levels in Shift Workers

Massimo Bracci, Alfredo Copertaro, Veronica Ciarapica, Mariella Barbaresi, Stefano Esposito, Antonella Albanesi, Matteo Valentino, Caterina Ledda, Venerando Rapisarda, Lory Santarelli

Biomed Res Int. 2019; 2019: 7582734. Published online 2019 Jul 31. doi: 10.1155/2019/7582734

PMCID:: PMC6699378

Abstract Article PDF–802K

Select item 65428004.

The metabolites NADP⁺ and NADPH are the targets of the circadian protein Nocturnin (Curled)

Michael A. Estrella, Jin Du, Li Chen, Sneha Rath, Eliza Prangley, Alisha Chitrakar, Tsutomu Aoki, Paul Schedl, Joshua Rabinowitz, Alexei Korennykh

Nat Commun. 2019; 10: 2367. Published online 2019 May 30. doi: 10.1038/s41467-019-10125-z

PMCID:: PMC6542800

Abstract Article PDF–1.9M

Select item 62845575.

Regulatory roles of vertebrate Nocturnin: insights and remaining mysteries

Kelsey L. Hughes, Elizabeth T. Abshire, Aaron C. Goldstrohm

RNA Biol. 2018; 15(10): 1255–1267. Published online 2018 Oct 9. doi: 10.1080/15476286.2018.1526541

PMCID:: PMC6284557

Abstract Article PDF–3.2M

Select item 62149456.

Crystal Structure of Human Nocturnin Catalytic Domain

Michael A. Estrella, Jin Du, Alexei Korennykh

Sci Rep. 2018; 8: 16294. Published online 2018 Nov 2. doi: 10.1038/s41598-018-34615-0

PMCID:: PMC6214945

Abstract Article PDF–2.2M

Select item 61587167.

The structure of human Nocturnin reveals a conserved ribonuclease domain that represses target transcript translation and abundance in cells

Elizabeth T Abshire, Jennifer Chasseur, Jennifer A Bohn, Paul A Del Rizzo, Peter L Freddolino, Aaron C Goldstrohm, Raymond C Trievel

Nucleic Acids Res. 2018 Jul 6; 46(12): 6257–6270. Published online 2018 Jun 1. doi: 10.1093/nar/gky412

PMCID:: PMC6158716

Abstract Article PDF–2.3M

Select item 55316118.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 46356099.

Poly(A)-specific ribonuclease and Nocturnin in squamous cell lung cancer: prognostic value and impact on gene expression

Panagiotis Maragozidis, Eirini Papanastasi, Diana Scutelnic, Athina Totomi, Ioanna Kokkori, Sotirios G. Zarogiannis, Theodora Kerenidi, Konstantinos I. Gourgoulianis, Nikolaos A. A. Balatsos

Mol Cancer. 2015; 14: 187. Published online 2015 Nov 5. doi: 10.1186/s12943-015-0457-3

PMCID:: PMC4635609

Abstract Article PDF–749K

Select item 461721110.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 372493911.

Genetic Variation in the NOC Gene Is Associated with Body Mass Index in Chinese Subjects

Yi-Cheng Chang, Yen-Feng Chiu, Pi-Hua Liu, Siow Wei Hee, Tien-Jyun Chang, Yi-Der Jiang, Wei-Jei Lee, Po-Chu Lee, Hui-Yi Kao, Juey-Jen Hwang, Lee-Ming Chuang

PLoS One. 2013; 8(7): e69622. Published online 2013 Jul 26. doi: 10.1371/journal.pone.0069622

PMCID:: PMC3724939

Abstract Article PDF–731K

Select item 361021412.

A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome

Gaëlle Blandin, Sylvie Marchand, Karine Charton, Nathalie Danièle, Evelyne Gicquel, Jean-Baptiste Boucheteil, Azéddine Bentaib, Laetitia Barrault, Daniel Stockholm, Marc Bartoli, Isabelle Richard

Skelet Muscle. 2013; 3: 3. Published online 2013 Feb 15. doi: 10.1186/2044-5040-3-3

PMCID:: PMC3610214

Abstract Article PDF–1.7M

Select item 337552813.

RNA Processing and Modification Protein, Carbon Catabolite Repression 4 (Ccr4), Arrests the Cell Cycle through p21-dependent and p53-independent Pathway

Xia Yi, Mei Hong, Bin Gui, Zhe Chen, Lei Li, Guojia Xie, Jing Liang, Xiaocheng Wang, Yongfeng Shang

J Biol Chem. 2012 Jun 15; 287(25): 21045–21057. Published online 2012 Apr 30. doi: 10.1074/jbc.M112.355321

PMCID:: PMC3375528

Abstract Article PDF–3.1M

Select item 317805914.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 294516815.

Variation at the NFATC2 Locus Increases the Risk of Thiazolidinedione-Induced Edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) Study

Swneke D. Bailey, Changchun Xie, Ron Do, Alexandre Montpetit, Rafael Diaz, Viswanathan Mohan, Bernard Keavney, Salim Yusuf, Hertzel C. Gerstein, James C. Engert, Sonia Anand, on behalf of the DREAM investigators

Diabetes Care. 2010 Oct; 33(10): 2250–2253. Published online 2010 Jul 13. doi: 10.2337/dc10-0452

PMCID:: PMC2945168

Abstract Article PDF–153K

Select item 277583216.

Gene-centric Association Signals for Lipids and Apolipoproteins Identified via the HumanCVD BeadChip

Philippa J. Talmud, Fotios Drenos, Sonia Shah, Tina Shah, Jutta Palmen, Claudio Verzilli, Tom R. Gaunt, Jacky Pallas, Ruth Lovering, Kawah Li, Juan Pablo Casas, Reecha Sofat, Meena Kumari, Santiago Rodriguez, Toby Johnson, Stephen J. Newhouse, Anna Dominiczak, Nilesh J. Samani, Mark Caulfield, Peter Sever, Alice Stanton, Denis C. Shields, on behalf of the ASCOT investigators, Sandosh Padmanabhan, Olle Melander, Claire Hastie, Christian Delles, on behalf of the NORDIL investigators, Shah Ebrahim, Michael G. Marmot, George Davey Smith, Debbie A. Lawlor, Patricia B. Munroe, for the BRIGHT Consortium, Ian N. Day, Mika Kivimaki, John Whittaker, Steve E. Humphries, Aroon D. Hingorani

Am J Hum Genet. 2009 Nov 13; 85(5): 628–642. doi: 10.1016/j.ajhg.2009.10.014

PMCID:: PMC2775832

Abstract Article PDF–2.8M

Select item 13924117.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 3224918.

Rhythmic expression of Nocturnin mRNA in multiple tissues of the mouse

Yunxia Wang, David L Osterbur, Pamela L Megaw, Gianluca Tosini, Chiaki Fukuhara, Carla B Green, Joseph C Besharse

BMC Dev Biol. 2001; 1: 9. Published online 2001 May 25. doi: 10.1186/1471-213X-1-9

PMCID:: PMC32249

Abstract Article PDF–2.7M

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PMC Links for GEO Profiles (Select 98315142) (18)
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PMC Links for GEO Profiles (Select 99563102) (98)
PMC
PREDICTED: Thunnus albacares G protein-coupled receptor 171 (gpr171), transcript...
PREDICTED: Thunnus albacares G protein-coupled receptor 171 (gpr171), transcript variant X1, mRNA
gi|2116795575|ref|XM_044355373.1|

Nucleotide
cytochrome b, partial (mitochondrion) [Sternotherus depressus]
cytochrome b, partial (mitochondrion) [Sternotherus depressus]
gi|1035644208|gb|ANJ43697.1|

Protein

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