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Select item 92626141.

A dual-activity topoisomerase complex regulates mRNA translation and turnover

Shuaikun Su, Yutong Xue, Alexei Sharov, Yongqing Zhang, Seung Kyu Lee, Jennifer L Martindale, Wen Li, Wai Lim Ku, Keji Zhao, Supriyo De, Weiping Shen, Payel Sen, Myriam Gorospe, Dongyi Xu, Weidong Wang

Nucleic Acids Res. 2022 Jul 8; 50(12): 7013–7033. Published online 2022 Jun 24. doi: 10.1093/nar/gkac538

PMCID:: PMC9262614

Abstract Article PDF–3.6M

Select item 83529642.

Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer

Athea Vichas, Amanda K. Riley, Naomi T. Nkinsi, Shriya Kamlapurkar, Phoebe C. R. Parrish, April Lo, Fujiko Duke, Jennifer Chen, Iris Fung, Jacqueline Watson, Matthew Rees, Austin M. Gabel, James D. Thomas, Robert K. Bradley, John K. Lee, Emily M. Hatch, Marina K. Baine, Natasha Rekhtman, Marc Ladanyi, Federica Piccioni, Alice H. Berger

Nat Commun. 2021; 12: 4789. Published online 2021 Aug 9. doi: 10.1038/s41467-021-24841-y

PMCID:: PMC8352964

Abstract Article PDF–4.5M

Select item 81650303.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 80090484.

Impact of cytosine methylation on DNA binding specificities of human transcription factors

Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale

Science. Author manuscript; available in PMC 2021 Mar 30.

Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239

PMCID:: PMC8009048

Abstract Article PDF–2.6M

Select item 75346415.

Temporal activation of LRH‐1 and RAR‐γ in human pluripotent stem cells induces a functional naïve‐like state

Adeleh Taei, Tahereh Kiani, Zeinab Taghizadeh, Sharif Moradi, Azam Samadian, Sepideh Mollamohammadi, Ali Sharifi‐Zarchi, Stefan Guenther, Azimeh Akhlaghpour, Behrouz Asgari Abibeiglou, Mostafa Najar‐Asl, Razieh Karamzadeh, Keynoosh Khalooghi, Thomas Braun, Seyedeh‐Nafiseh Hassani, Hossein Baharvand

EMBO Rep. 2020 Oct 5; 21(10): e47533. Published online 2020 Aug 16. doi: 10.15252/embr.201847533

PMCID:: PMC7534641

Abstract Article PDF–4.8M

Select item 73167886.

Variation in RARG increases susceptibility to doxorubicin-induced cardiotoxicity in patient specific induced pluripotent stem cell-derived cardiomyocytes

Effimia Christidi, Haojun Huang, Sanam Shafaattalab, Agnes Maillet, Eric Lin, Kate Huang, Zachary Laksman, Margot K. Davis, Glen F. Tibbits, Liam R. Brunham

Sci Rep. 2020; 10: 10363. Published online 2020 Jun 25. doi: 10.1038/s41598-020-65979-x

PMCID:: PMC7316788

Abstract Article PDF–3.7M

Select item 71699837.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 64847728.

S100A3 a partner protein regulating the stability/activity of RARα and PML-RARα in cellular models of breast/lung cancer and acute myeloid leukemia

Maurizio Gianni, Mineko Terao, Mami Kurosaki, Gabriela Paroni, Laura Brunelli, Roberta Pastorelli, Adriana Zanetti, Monica Lupi, Andrea Acquavita, Marco Bolis, Maddalena Fratelli, Cecile Rochette-Egly, Enrico Garattini

Oncogene. 2019; 38(14): 2482–2500. Published online 2018 Dec 7. doi: 10.1038/s41388-018-0599-z

Correction in:: Oncogene. 2023; 42(3): 254–258.

PMCID:: PMC6484772

Abstract Article PDF–7.7M

Select item 63366869.

The miR-96 and RARγ signaling axis governs androgen signaling and prostate cancer progression

Mark D. Long, Prashant K. Singh, James R. Russell, Gerard Llimos, Spencer Rosario, Abbas Rizvi, Patrick R. van den Berg, Jason Kirk, Lara E. Sucheston-Campbell, Dominic J. Smiraglia, Moray J. Campbell

Oncogene. 2019; 38(3): 421–444. Published online 2018 Aug 17. doi: 10.1038/s41388-018-0450-6

PMCID:: PMC6336686

Abstract Article PDF–6.2M

Select item 566819410.

Cross talk between progesterone receptors and retinoic acid receptors in regulation of cytokeratin 5-positive breast cancer cells

LM Fettig, O McGinn, J Finlay-Schultz, DV LaBarbera, SK Nordeen, CA Sartorius

Oncogene. Author manuscript; available in PMC 2017 Nov 3.

Published in final edited form as: Oncogene. 2017 Nov 2; 36(44): 6074–6084. Published online 2017 Jul 10. doi: 10.1038/onc.2017.204

PMCID:: PMC5668194

Abstract Article PDF–1.3M

Select item 558317811.

The cytoplasmic nuclear receptor RARγ controls RIP1 initiated cell death when cIAP activity is inhibited

Qing Xu, Siriporn Jitkaew, Swati Choksi, Chamila Kadigamuwa, Jianhui Qu, Moran Choe, Jonathan Jang, Chengyu Liu, Zheng-gang Liu

Nat Commun. 2017; 8: 425. Published online 2017 Sep 4. doi: 10.1038/s41467-017-00496-6

PMCID:: PMC5583178

Abstract Article PDF–4.2M

Select item 553161112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 544613113.

Retinoic acid receptor gamma impacts cellular adhesion, Alpha5Beta1 integrin expression and proliferation in K562 cells

Melissa D. Kelley, Raynin Phomakay, Madison Lee, Victoria Niedzwiedz, Rachel Mayo

PLoS One. 2017; 12(5): e0178116. Published online 2017 May 26. doi: 10.1371/journal.pone.0178116

PMCID:: PMC5446131

Abstract Article PDF–1.7M

Select item 542801714.

Targeting to the non-genomic activity of retinoic acid receptor-gamma by acacetin in hepatocellular carcinoma

Wenjun Zeng, Chunyun Zhang, Hongwei Cheng, Yun-Long Wu, Jie Liu, Zekun Chen, Jian-gang Huang, Russell Erick Ericksen, Liqun Chen, Haiping Zhang, Alice Sze Tsai Wong, Xiao-kun Zhang, Weiping Han, Jin-Zhang Zeng

Sci Rep. 2017; 7: 348. Published online 2017 Mar 23. doi: 10.1038/s41598-017-00233-5

PMCID:: PMC5428017

Abstract Article PDF–3.7M

Select item 539725815.

Oncogenic retinoic acid receptor γ knockdown reverses multi-drug resistance of human colorectal cancer via Wnt/β-catenin pathway

Gui-Li Huang, Wei Song, Pan Zhou, Qi-Rui Fu, Chen-Lu Lin, Qing-Xi Chen, Dong-Yan Shen

Cell Cycle. 2017; 16(7): 685–692. Published online 2017 Mar 8. doi: 10.1080/15384101.2017.1295180

PMCID:: PMC5397258

Abstract Article PDF–1.0M

Select item 506989216.

RARγ-induced E-cadherin downregulation promotes hepatocellular carcinoma invasion and metastasis

Wen-Juan Gan, Jing-Ru Wang, Xiao-Li Zhu, Xiao-Shun He, Peng-Da Guo, Shen Zhang, Xiu-Ming Li, Jian-Ming Li, Hua Wu

J Exp Clin Cancer Res. 2016; 35: 164. Published online 2016 Oct 19. doi: 10.1186/s13046-016-0441-9

PMCID:: PMC5069892

Abstract Article PDF–2.5M

Select item 455257017.

A Coding Variant in RARG Confers Susceptibility to Anthracycline-Induced Cardiotoxicity in Childhood Cancer

Folefac Aminkeng, Amit P. Bhavsar, Henk Visscher, Shahrad R. Rassekh, Yuling Li, Jong W. Lee, Liam R. Brunham, Huib N. Caron, Elvira C. van Dalen, Leontien C. Kremer, Helena J. van der Pal, Ursula Amstutz, Michael J. Rieder, Daniel Bernstein, Bruce C. Carleton, Michael R. Hayden, Colin J.D. Ross, The Canadian Pharmacogenomics Network for Drug Safety Consortium

Nat Genet. Author manuscript; available in PMC 2016 Mar 1.

Published in final edited form as: Nat Genet. 2015 Sep; 47(9): 1079–1084. Published online 2015 Aug 3. doi: 10.1038/ng.3374

PMCID:: PMC4552570

Article PDF–499K

Select item 410454418.

A quantitative chaperone interaction network reveals the architecture of cellular protein homeostasis pathways

Mikko Taipale, George Tucker, Jian Peng, Irina Krykbaeva, Zhen-Yuan Lin, Brett Larsen, Hyungwon Choi, Bonnie Berger, Anne-Claude Gingras, Susan Lindquist

Cell. Author manuscript; available in PMC 2015 Jul 17.

Published in final edited form as: Cell. 2014 Jul 17; 158(2): 434–448. doi: 10.1016/j.cell.2014.05.039

PMCID:: PMC4104544

Abstract Article PDF–3.2M

Select item 375384819.

Oncogenic Activity of Retinoic Acid Receptor γ Is Exhibited through Activation of the Akt/NF-κB and Wnt/β-Catenin Pathways in Cholangiocarcinoma

Gui-Li Huang, Qi Luo, Gang Rui, Wei Zhang, Qiu-Yan Zhang, Qing-Xi Chen, Dong-Yan Shen

Mol Cell Biol. 2013 Sep; 33(17): 3416–3425. doi: 10.1128/MCB.00384-13

PMCID:: PMC3753848

Abstract Article PDF–2.9M

Select item 367409020.

CDK1 interacts with RARγ and plays an important role in treatment response of acute myeloid leukemia

Andreas Hedblom, Kristian B. Laursen, Regina Miftakhova, Martuza Sarwar, Lola Anagnostaki, Anders Bredberg, Nigel P. Mongan, Lorraine J. Gudas, Jenny L. Persson

Cell Cycle. 2013 Apr 15; 12(8): 1251–1266. Published online 2013 Mar 21. doi: 10.4161/cc.24313

PMCID:: PMC3674090

Abstract Article PDF–3.9M

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