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Select item 60650151.

Affinity switching of the LEDGF/p75 IBD interactome is governed by kinase-dependent phosphorylation

Subhalakshmi Sharma, Kateřina Čermáková, Jan De Rijck, Jonas Demeulemeester, Milan Fábry, Sara El Ashkar, Siska Van Belle, Martin Lepšík, Petr Tesina, Vojtěch Duchoslav, Petr Novák, Martin Hubálek, Pavel Srb, Frauke Christ, Pavlína Řezáčová, H. Courtney Hodges, Zeger Debyser, Václav Veverka

Proc Natl Acad Sci U S A. 2018 Jul 24; 115(30): E7053–E7062. Published online 2018 Jul 11. doi: 10.1073/pnas.1803909115

PMCID:: PMC6065015

Abstract Article PDF–1.8M

Select item 43882782.

CCAR1/CoCoA pair-mediated recruitment of the Mediator defines a novel pathway for GATA1 function

Shumpei Mizuta, Tomoya Minami, Haruka Fujita, Chihiro Kaminaga, Keiji Matsui, Ruri Ishino, Azusa Fujita, Kasumi Oda, Asami Kawai, Natsumi Hasegawa, Norinaga Urahama, Robert G. Roeder, Mitsuhiro Ito

Genes Cells. Author manuscript; available in PMC 2015 Apr 7.

Published in final edited form as: Genes Cells. 2014 Jan; 19(1): 28–51. Published online 2013 Nov 19. doi: 10.1111/gtc.12104

Correction in:: Genes Cells. 2023 Jan; 28(1): 78.

PMCID:: PMC4388278

Abstract Article PDF–3.1M

Select item 30395703.

Initial characterization of the human central proteome

Thomas R Burkard, Melanie Planyavsky, Ines Kaupe, Florian P Breitwieser, Tilmann Bürckstümmer, Keiryn L Bennett, Giulio Superti-Furga, Jacques Colinge

BMC Syst Biol. 2011; 5: 17. Published online 2011 Jan 26. doi: 10.1186/1752-0509-5-17

PMCID:: PMC3039570

Abstract Article PDF–2.3M

Select item 27091994.

Large-scale Proteomics Analysis of the Human Kinome

Felix S. Oppermann, Florian Gnad, Jesper V. Olsen, Renate Hornberger, Zoltán Greff, György Kéri, Matthias Mann, Henrik Daub

Mol Cell Proteomics. 2009 Jul; 8(7): 1751–1764. Published online 2009 Apr 15. doi: 10.1074/mcp.M800588-MCP200

PMCID:: PMC2709199

Abstract Article PDF–993K

Select item 25048355.

A quantitative atlas of mitotic phosphorylation

Noah Dephoure, Chunshui Zhou, Judit Villén, Sean A. Beausoleil, Corey E. Bakalarski, Stephen J. Elledge, Steven P. Gygi

Proc Natl Acad Sci U S A. 2008 Aug 5; 105(31): 10762–10767. Published online 2008 Jul 31. doi: 10.1073/pnas.0805139105

PMCID:: PMC2504835

Abstract Article PDF–1.0M

Select item 16368136.

Mediator Modulates Gli3-Dependent Sonic Hedgehog Signaling

Haiying Zhou, Seokjoong Kim, Shunsuke Ishii, Thomas G. Boyer

Mol Cell Biol. 2006 Dec; 26(23): 8667–8682. Published online 2006 Sep 25. doi: 10.1128/MCB.00443-06

PMCID:: PMC1636813

Abstract Article PDF–610K

Select item 13169587.

Activation of TRAP/Mediator Subunit TRAP220/Med1 Is Regulated by Mitogen-Activated Protein Kinase-Dependent Phosphorylation

Pradeep K. Pandey, T. S. Udayakumar, Xinjie Lin, Dipali Sharma, Paul S. Shapiro, Joseph D. Fondell

Mol Cell Biol. 2005 Dec; 25(24): 10695–10710. doi: 10.1128/MCB.25.24.10695-10710.2005

PMCID:: PMC1316958

Abstract Article PDF–708K

Select item 5289288.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 5150429.

Structural and Functional Organization of TRAP220, the TRAP/Mediator Subunit That Is Targeted by Nuclear Receptors

Sohail Malik, Mohamed Guermah, Chao-Xing Yuan, Weizhen Wu, Soichiro Yamamura, Robert G. Roeder

Mol Cell Biol. 2004 Sep; 24(18): 8244–8254. doi: 10.1128/MCB.24.18.8244-8254.2004

Correction in:: Mol Cell Biol. 2022 Nov; 42(11): e00359-22.

PMCID:: PMC515042

Abstract Article PDF–359K

Select item 12299810.

Ordered recruitment of histone acetyltransferases and the TRAP/Mediator complex to thyroid hormone-responsive promoters in vivo

Dipali Sharma, Joseph D. Fondell

Proc Natl Acad Sci U S A. 2002 Jun 11; 99(12): 7934–7939. Published online 2002 May 28. doi: 10.1073/pnas.122004799

PMCID:: PMC122998

Abstract Article PDF–240K

Select item 12240111.

The TRAP/Mediator coactivator complex interacts directly with estrogen receptors α and β through the TRAP220 subunit and directly enhances estrogen receptor function invitro

Yun Kyoung Kang, Mohamed Guermah, Chao-Xing Yuan, Robert G. Roeder

Proc Natl Acad Sci U S A. 2002 Mar 5; 99(5): 2642–2647. Published online 2002 Feb 26. doi: 10.1073/pnas.261715899

PMCID:: PMC122401

Abstract Article PDF–285K

Select item 8548712.

The DRIP Complex and SRC-1/p160 Coactivators Share Similar Nuclear Receptor Binding Determinants but Constitute Functionally Distinct Complexes

Christophe Rachez, Matthew Gamble, Chao-Pei Betty Chang, G. Brandon Atkins, Mitchell A. Lazar, Leonard P. Freedman

Mol Cell Biol. 2000 Apr; 20(8): 2718–2726. doi: 10.1128/mcb.20.8.2718-2726.2000

PMCID:: PMC85487

Abstract Article PDF–3.8M

Select item 2090813.

The TRAP220 component of a thyroid hormone receptor- associated protein (TRAP) coactivator complex interacts directly with nuclear receptors in a ligand-dependent fashion

Chao-Xing Yuan, Mitsuhiro Ito, Joseph D. Fondell, Zheng-Yuan Fu, Robert G. Roeder

Proc Natl Acad Sci U S A. 1998 Jul 7; 95(14): 7939–7944. doi: 10.1073/pnas.95.14.7939

Correction in:: Proc Natl Acad Sci U S A. 1998 Nov 24; 95(24): 14584.

PMCID:: PMC20908

Abstract Article PDF–409K

Select item 691675514.

Analog-sensitive cell line identifies cellular substrates of CDK9

Tim-Michael Decker, Ignasi Forné, Tobias Straub, Hesham Elsaman, Guoli Ma, Nilay Shah, Axel Imhof, Dirk Eick

Oncotarget. 2019 Dec 10; 10(65): 6934–6943. Published online 2019 Dec 10. doi: 10.18632/oncotarget.27334

PMCID:: PMC6916755

Abstract Article PDF–1.7M

Select item 671364315.

Cytosolic phospholipase A2α modulates cell-matrix adhesion via the FAK/paxillin pathway in hepatocellular carcinoma

Piao Guo, Yuchao He, Lu Chen, Lisha Qi, Dongming Liu, Ziye Chen, Manyu Xiao, Liwei Chen, Yi Luo, Ning Zhang, Hua Guo

Cancer Biol Med. 2019 May; 16(2): 377–390. doi: 10.20892/j.issn.2095-3941.2018.0386

PMCID:: PMC6713643

Abstract Article PDF–16M

Select item 669132816.

DeepPhos: prediction of protein phosphorylation sites with deep learning

Fenglin Luo, Minghui Wang, Yu Liu, Xing-Ming Zhao, Ao Li

Bioinformatics. 2019 Aug 15; 35(16): 2766–2773. Published online 2019 Jan 2. doi: 10.1093/bioinformatics/bty1051

PMCID:: PMC6691328

Abstract Article PDF–630K

Select item 562539217.

Discovery and Validation of a Six-Marker Serum Protein Signature for the Diagnosis of Active Pulmonary Tuberculosis

Mary A. De Groote, David G. Sterling, Thomas Hraha, Theresa M. Russell, Louis S. Green, Kirsten Wall, Stephan Kraemer, Rachel Ostroff, Nebojsa Janjic, Urs A. Ochsner

J Clin Microbiol. 2017 Oct; 55(10): 3057–3071. Prepublished online 2017 Aug 9. Published online 2017 Sep 25. doi: 10.1128/JCM.00467-17

PMCID:: PMC5625392

Abstract Article PDF–1.1M

Select item 521057818.

InterPro in 2017—beyond protein family and domain annotations

Robert D. Finn, Teresa K. Attwood, Patricia C. Babbitt, Alex Bateman, Peer Bork, Alan J. Bridge, Hsin-Yu Chang, Zsuzsanna Dosztányi, Sara El-Gebali, Matthew Fraser, Julian Gough, David Haft, Gemma L. Holliday, Hongzhan Huang, Xiaosong Huang, Ivica Letunic, Rodrigo Lopez, Shennan Lu, Aron Marchler-Bauer, Huaiyu Mi, Jaina Mistry, Darren A. Natale, Marco Necci, Gift Nuka, Christine A. Orengo, Youngmi Park, Sebastien Pesseat, Damiano Piovesan, Simon C. Potter, Neil D. Rawlings, Nicole Redaschi, Lorna Richardson, Catherine Rivoire, Amaia Sangrador-Vegas, Christian Sigrist, Ian Sillitoe, Ben Smithers, Silvano Squizzato, Granger Sutton, Narmada Thanki, Paul D Thomas, Silvio C. E. Tosatto, Cathy H. Wu, Ioannis Xenarios, Lai-Su Yeh, Siew-Yit Young, Alex L. Mitchell

Nucleic Acids Res. 2017 Jan 4; 45(Database issue): D190–D199. Published online 2016 Nov 28. doi: 10.1093/nar/gkw1107

PMCID:: PMC5210578

Abstract Article PDF–2.3M

Select item 444636419.

Selective Recruitment of Nuclear Factors to Productively Replicating Herpes Simplex Virus Genomes

Jill A. Dembowski, Neal A. DeLuca

PLoS Pathog. 2015 May; 11(5): e1004939. Published online 2015 May 27. doi: 10.1371/journal.ppat.1004939

PMCID:: PMC4446364

Abstract Article PDF–10M

Select item 411450620.

The Transcriptional Coactivator DRIP/Mediator Complex Is Involved in Vitamin D Receptor Function and Regulates Keratinocyte Proliferation and Differentiation

Yuko Oda, Robert J. Chalkley, Alma L. Burlingame, Daniel D. Bikle

J Invest Dermatol. Author manuscript; available in PMC 2014 Jul 29.

Published in final edited form as: J Invest Dermatol. 2010 Oct; 130(10): 2377–2388. Published online 2010 Jun 3. doi: 10.1038/jid.2010.148

PMCID:: PMC4114506

Abstract Article PDF–661K

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