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Items: 1 to 20 of 23

1.
Additive loss-of-function proteasome subunit mutations in CANDLE/PRAAS patients promote type I IFN production
Anja Brehm, Yin Liu, Afzal Sheikh, Bernadette Marrero, Ebun Omoyinmi, Qing Zhou, Gina Montealegre, Angelique Biancotto, Adam Reinhardt, Adriana Almeida de Jesus, Martin Pelletier, Wanxia L. Tsai, Elaine F. Remmers, Lela Kardava, Suvimol Hill, Hanna Kim, Helen J. Lachmann, Andre Megarbane, Jae Jin Chae, Jilian Brady, Rhina D. Castillo, Diane Brown, Angel Vera Casano, Ling Gao, Dawn Chapelle, Yan Huang, Deborah Stone, Yongqing Chen, Franziska Sotzny, Chyi-Chia Richard Lee, Daniel L. Kastner, Antonio Torrelo, Abraham Zlotogorski, Susan Moir, Massimo Gadina, Phil McCoy, Robert Wesley, Kristina Rother, Peter W. Hildebrand, Paul Brogan, Elke Krüger, Ivona Aksentijevich, Raphaela Goldbach-Mansky
J Clin Invest. 2015 Nov 2; 125(11): 4196–4211. Published online 2015 Oct 20. doi: 10.1172/JCI81260
Correction in:
J Clin Invest. 2016 Feb 1; 126(2): 795.
PMCID:
PMC4639987
AbstractArticlePDF–5.7M
2.
Initial characterization of the human central proteome
Thomas R Burkard, Melanie Planyavsky, Ines Kaupe, Florian P Breitwieser, Tilmann Bürckstümmer, Keiryn L Bennett, Giulio Superti-Furga, Jacques Colinge
BMC Syst Biol. 2011; 5: 17. Published online 2011 Jan 26. doi: 10.1186/1752-0509-5-17
PMCID:
PMC3039570
AbstractArticlePDF–2.3M
3.
CD40 Induces Antigen Transporter and Immunoproteasome Gene Expression in Carcinomas via the Coordinated Action of NF-κB and of NF-κB-Mediated De Novo Synthesis of IRF-1
Aristides Moschonas, Maria Kouraki, Pauline G. Knox, Efstathia Thymiakou, Dimitris Kardassis, Aristides G. Eliopoulos
Mol Cell Biol. 2008 Oct; 28(20): 6208–6222. Published online 2008 Aug 11. doi: 10.1128/MCB.00611-08
PMCID:
PMC2577429
AbstractArticlePDF–1.8M
4.
The catalytic subunit of the proteasome is engaged in the entire process of estrogen receptor-regulated transcription
Hua Zhang, Luyang Sun, Jing Liang, Wenhua Yu, Ying Zhang, Yan Wang, Yupeng Chen, Ruifang Li, Xiaojing Sun, Yongfeng Shang
EMBO J. 2006 Sep 20; 25(18): 4223–4233. Published online 2006 Sep 7. doi: 10.1038/sj.emboj.7601306
PMCID:
PMC1570434
AbstractArticlePDF–307K
5.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
6.
Analysis of mammalian 20S proteasome biogenesis: the maturation of beta-subunits is an ordered two-step mechanism involving autocatalysis.
G Schmidtke, R Kraft, S Kostka, P Henklein, C Frömmel, J Löwe, R Huber, P M Kloetzel, M Schmidt
EMBO J. 1996 Dec 16; 15(24): 6887–6898.
PMCID:
PMC452515
SummaryPage BrowsePDF–2.8M
7.
Top-Down and Intact Protein Mass Spectrometry Data Visualization for Proteoform Analysis Using VisioProt-MS
Jean Lesne, Marie-Pierre Bousquet, Julien Marcoux, Marie Locard-Paulet
Bioinform Biol Insights. 2019; 13: 1177932219868223. Published online 2019 Aug 16. doi: 10.1177/1177932219868223
PMCID:
PMC6698994
AbstractArticlePDF–1.9M
8.
ANGIOGENIC AND IMMUNOLOGIC PROTEINS IDENTIFIED BY DEEP PROTEOMIC PROFILING OF HUMAN RETINAL AND CHOROIDAL VASCULAR ENDOTHELIAL CELLS: POTENTIAL TARGETS FOR NEW BIOLOGIC DRUGS
Justine R. Smith, Larry L. David, Binoy Appukuttan, Phillip A. Wilmarth
Am J Ophthalmol. Author manuscript; available in PMC 2019 Sep 1.
Published in final edited form as: Am J Ophthalmol. 2018 Sep; 193: 197–229. Published online 2018 Mar 17. doi: 10.1016/j.ajo.2018.03.020
PMCID:
PMC6109601
AbstractArticlePDF–826K
9.
A rapid and accurate approach for prediction of interactomes from co-elution data (PrInCE)
R. Greg Stacey, Michael A. Skinnider, Nichollas E. Scott, Leonard J. Foster
BMC Bioinformatics. 2017; 18: 457. Published online 2017 Oct 23. doi: 10.1186/s12859-017-1865-8
PMCID:
PMC5654062
AbstractArticlePDF–3.1M
10.
Prediction of adjuvant chemotherapy response in triple negative breast cancer with discovery and targeted proteomics
Angelo Gámez-Pozo, Lucía Trilla-Fuertes, Guillermo Prado-Vázquez, Cristina Chiva, Rocío López-Vacas, Paolo Nanni, Julia Berges-Soria, Jonas Grossmann, Mariana Díaz-Almirón, Eva Ciruelos, Eduard Sabidó, Enrique Espinosa, Juan Ángel Fresno Vara
PLoS One. 2017; 12(6): e0178296. Published online 2017 Jun 8. doi: 10.1371/journal.pone.0178296
PMCID:
PMC5464546
AbstractArticlePDF–2.3M
11.
Determination of differentially regulated proteins upon proteasome inhibition in AML cell lines by the combination of large‐scale and targeted quantitative proteomics
Mariette Matondo, Marlène Marcellin, Karima Chaoui, Marie‐Pierre Bousquet‐Dubouch, Anne Gonzalez‐de‐Peredo, Bernard Monsarrat, Odile Burlet‐Schiltz
Proteomics. 2017 Apr; 17(7): 1600089. Published online 2016 Dec 21. doi: 10.1002/pmic.201600089
PMCID:
PMC5396343
AbstractArticlePDF–1.6M
12.
Mismatch in epitope specificities between IFNγ inflamed and uninflamed conditions leads to escape from T lymphocyte killing in melanoma
Katherine Woods, Ashley J. Knights, Matthew Anaka, Ralf B. Schittenhelm, Anthony W. Purcell, Andreas Behren, Jonathan Cebon
J Immunother Cancer. 2016; 4: 10. Published online 2016 Feb 16. doi: 10.1186/s40425-016-0111-7
PMCID:
PMC4754849
AbstractArticlePDF–1.9M
13.
Immunoproteasomes: Structure, Function, and Antigen Presentation
Deborah A. Ferrington, Dale S. Gregerson
Prog Mol Biol Transl Sci. Author manuscript; available in PMC 2015 Apr 21.
Published in final edited form as: Prog Mol Biol Transl Sci. 2012; 109: 75–112. doi: 10.1016/B978-0-12-397863-9.00003-1
PMCID:
PMC4405001
AbstractArticlePDF–2.1M
14.
Annotating N Termini for the Human Proteome Project: N Termini and Nα-Acetylation Status Differentiate Stable Cleaved Protein Species from Degradation Remnants in the Human Erythrocyte Proteome
Philipp F. Lange, Pitter F. Huesgen, Karen Nguyen, Christopher M. Overall
J Proteome Res. 2014 Apr 4; 13(4): 2028–2044. Published online 2014 Feb 21. doi: 10.1021/pr401191w
PMCID:
PMC3979129
AbstractArticlePDF–3.9M
15.
Dysferlin and Other Non-Red Cell Proteins Accumulate in the Red Cell Membrane of Diamond-Blackfan Anemia Patients
Esther N. Pesciotta, Sira Sriswasdi, Hsin-Yao Tang, David W. Speicher, Philip J. Mason, Monica Bessler
PLoS One. 2014; 9(1): e85504. Published online 2014 Jan 14. doi: 10.1371/journal.pone.0085504
PMCID:
PMC3891812
AbstractArticlePDF–4.2M
16.
Role of the Retinal Vascular Endothelial Cell in Ocular Disease
Arpita S. Bharadwaj, Binoy Appukuttan, Phillip A. Wilmarth, Yuzhen Pan, Andrew J. Stempel, Timothy J. Chipps, Eric E. Benedetti, David O. Zamora, Dongseok Choi, Larry L. David, Justine R. Smith
Prog Retin Eye Res. Author manuscript; available in PMC 2014 Jan 1.
Published in final edited form as: Prog Retin Eye Res. 2013 Jan; 32: 102–180. Published online 2012 Sep 11. doi: 10.1016/j.preteyeres.2012.08.004
PMCID:
PMC3679193
AbstractArticlePDF–2.0M
17.
In-depth Characterization of the Secretome of Colorectal Cancer Metastatic Cells Identifies Key Proteins in Cell Adhesion, Migration, and Invasion
Rodrigo Barderas, Marta Mendes, Sofia Torres, Rubén A. Bartolomé, María López-Lucendo, Roi Villar-Vázquez, Alberto Peláez-García, Eduardo Fuente, Félix Bonilla, J. Ignacio Casal
Mol Cell Proteomics. 2013 Jun; 12(6): 1602–1620. Published online 2013 Feb 26. doi: 10.1074/mcp.M112.022848
PMCID:
PMC3675817
AbstractArticlePDF–2.7M
18.
Phosphatidylinositol (3,4,5)-Trisphosphate Activity Probes for the Labeling and Proteomic Characterization of Protein Binding Partners
Meng M. Rowland, Heidi E. Bostic, Denghuang Gong, Anna E. Speers, Nathan Lucas, Wonhwa Cho, Benjamin F. Cravatt, Michael D. Best
Biochemistry. Author manuscript; available in PMC 2013 May 9.
Published in final edited form as: Biochemistry. 2011 Dec 27; 50(51): 11143–11161. Published online 2011 Nov 30. doi: 10.1021/bi201636s
PMCID:
PMC3649876
AbstractArticlePDF–3.4M
19.
Toward the Proteome of the Human Peripheral Blood Eosinophil
Christof Straub, Konrad Pazdrak, Travis W. Young, Susan J. Stafford, Zheng Wu, John E. Wiktorowicz, Anthony M. Haag, Robert D. English, Kizhake V. Soman, Alexander Kurosky
Proteomics Clin Appl. Author manuscript; available in PMC 2010 Nov 1.
Published in final edited form as: Proteomics Clin Appl. 2009; 3(10): 1151–1173. doi: 10.1002/prca.200900043
PMCID:
PMC2967046
AbstractArticlePDF–1.0M
20.
Molecular Basis of the Selectivity of the Immunoproteasome Catalytic Subunit LMP2-Specific Inhibitor Revealed by Molecular Modeling and Dynamics Simulations
Beilei Lei, Mohamed Diwan M. AbdulHameed, Adel Hamza, Marie Wehenkel, Jennifer L. Muzyka, Xiao-Jun Yao, Kyung-Bo Kim, Chang-Guo Zhan
J Phys Chem B. Author manuscript; available in PMC 2011 Sep 30.
Published in final edited form as: J Phys Chem B. 2010 Sep 30; 114(38): 12333–12339. doi: 10.1021/jp1058098
PMCID:
PMC2945215
AbstractArticlePDF–4.0M

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