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Items: 1 to 20 of 62

1.
Beneficial Endophytic Bacterial Populations Associated With Medicinal Plant Thymus vulgaris Alleviate Salt Stress and Confer Resistance to Fusarium oxysporum
Osama Abdalla Abdelshafy Mohamad, Jin-Biao Ma, Yong-Hong Liu, Daoyuan Zhang, Shao Hua, Shrikant Bhute, Brian P. Hedlund, Wen-Jun Li, Li Li
Front Plant Sci. 2020; 11: 47. Published online 2020 Feb 14. doi: 10.3389/fpls.2020.00047
PMCID:
PMC7033553
AbstractArticlePDF–8.7M
2.
Modular engineering for microbial production of carotenoids
Cheng Li, Charles A. Swofford, Anthony J. Sinskey
Metab Eng Commun. 2020 Jun; 10: e00118. Published online 2019 Dec 15. doi: 10.1016/j.mec.2019.e00118
PMCID:
PMC6938962
AbstractArticlePDF–1.7M
3.
Microbial carbon use efficiency predicted from genome-scale metabolic models
Mustafa Saifuddin, Jennifer M. Bhatnagar, Daniel Segrè, Adrien C. Finzi
Nat Commun. 2019; 10: 3568. Published online 2019 Aug 8. doi: 10.1038/s41467-019-11488-z
PMCID:
PMC6687798
AbstractArticlePDF–1013K
4.
Fermented Garlic Extract Increases Oxygen Consumption and UCP-1 mRNA Expression in Human Adipose-Derived Stem Cells
Eulsoon Park, Seung-Hwa Baek, Keuk-Su Bang, Na-Hyung Kim, Koichi Takimoto
Cell J. 2019 Autumn; 21(3): 357–362. Published online 2019 Jun 15. doi: 10.22074/cellj.2019.6382
PMCID:
PMC6582415
AbstractArticlePDF–835K
5.
Prioritizing bona fide bacterial small RNAs with machine learning classifiers
Erik J.J. Eppenhof, Lourdes Peña-Castillo
PeerJ. 2019; 7: e6304. Published online 2019 Jan 24. doi: 10.7717/peerj.6304
PMCID:
PMC6348098
AbstractArticlePDF–767K
6.
Optimization and molecular identification of novel cellulose degrading bacteria isolated from Egyptian environment
Azhar A. Hussain, Mohamed S. Abdel-Salam, Hoda H. Abo-Ghalia, Wafaa K. Hegazy, Safa S. Hafez
J Genet Eng Biotechnol. 2017 Jun; 15(1): 77–85. Published online 2017 Mar 14. doi: 10.1016/j.jgeb.2017.02.007
PMCID:
PMC6296635
AbstractArticlePDF–1.5M
7.
Insights into the draft genome sequence of bioactives-producing Bacillus thuringiensis DNG9 isolated from Algerian soil-oil slough
Mohamed Seghir Daas, Albert Remus R. Rosana, Jeella Z. Acedo, Malika Douzane, Farida Nateche, Salima Kebbouche-Gana, John C. Vederas
Stand Genomic Sci. 2018; 13: 25. Published online 2018 Oct 11. doi: 10.1186/s40793-018-0331-1
PMCID:
PMC6186030
AbstractArticlePDF–3.0M
8.
Understanding the ontogeny and succession of Bacillus velezensis and B. subtilis subsp. subtilis by focusing on kimchi fermentation
Min Seok Cho, Yong Ju Jin, Bo Kyoung Kang, Yu Kyoung Park, ChangKug Kim, Dong Suk Park
Sci Rep. 2018; 8: 7045. Published online 2018 May 4. doi: 10.1038/s41598-018-25514-5
PMCID:
PMC5935750
AbstractArticlePDF–1.7M
9.
Comparative Genomics of Completely Sequenced Lactobacillus helveticus Genomes Provides Insights into Strain-Specific Genes and Resolves Metagenomics Data Down to the Strain Level
Michael Schmid, Jonathan Muri, Damianos Melidis, Adithi R. Varadarajan, Vincent Somerville, Adrian Wicki, Aline Moser, Marc Bourqui, Claudia Wenzel, Elisabeth Eugster-Meier, Juerg E. Frey, Stefan Irmler, Christian H. Ahrens
Front Microbiol. 2018; 9: 63. Published online 2018 Jan 30. doi: 10.3389/fmicb.2018.00063
PMCID:
PMC5797582
AbstractArticlePDF–4.0M
10.
Optimization of Effective Minerals on Riboflavin Production by Bacillus subtilis subsp. subtilis ATCC 6051 Using Statistical Designs
Marjan Oraei, Seyed Hadi Razavi, Faramarz Khodaiyan
Avicenna J Med Biotechnol. 2018 Jan-Mar; 10(1): 49–55.
PMCID:
PMC5742654
AbstractArticlePDF–575K
11.
Draft genome sequences of two opportunistic pathogenic strains of Staphylococcus cohnii isolated from human patients
Soraya Mendoza-Olazarán, José F. Garcia-Mazcorro, Rayo Morfín-Otero, Licet Villarreal-Treviño, Adrián Camacho-Ortiz, Eduardo Rodríguez-Noriega, Paola Bocanegra-Ibarias, Héctor J. Maldonado-Garza, Scot E. Dowd, Elvira Garza-González
Stand Genomic Sci. 2017; 12: 49. Published online 2017 Aug 31. doi: 10.1186/s40793-017-0263-1
PMCID:
PMC5580220
AbstractArticlePDF–1.0M
12.
Analysis of EAWAG-BBD pathway prediction system for the identification of malathion degrading microbes
Subramaniam Sivakumar, Palanivel Anitha, Balsubramanian Ramesh, Gopal Suresh
Bioinformation. 2017; 13(3): 73–77. Published online 2017 Mar 31. doi: 10.6026/97320630013073
PMCID:
PMC5450248
AbstractArticlePDF–717K
13.
Isolation, identification and characterization of Paenibacillus polymyxa CR1 with potentials for biopesticide, biofertilization, biomass degradation and biofuel production
Brian Weselowski, Naeem Nathoo, Alexander William Eastman, Jacqueline MacDonald, Ze-Chun Yuan
BMC Microbiol. 2016; 16: 244. Published online 2016 Oct 18. doi: 10.1186/s12866-016-0860-y
PMCID:
PMC5069919
AbstractArticlePDF–1.1M
14.
Protein domain architectures provide a fast, efficient and scalable alternative to sequence-based methods for comparative functional genomics
Jasper J. Koehorst, Edoardo Saccenti, Peter J. Schaap, Vitor A. P. Martins dos Santos, Maria Suarez-Diez
Version 3. F1000Res. 2016; 5: 1987. Published online 2017 Jun 27. doi: 10.12688/f1000research.9416.3
PMCID:
PMC5031134
AbstractArticlePDF–5.2M
15.
Data from computational analysis of the peptide linkers in the MocR bacterial transcriptional regulators
Sebastiana Angelaccio, Teresa Milano, Angela Tramonti, Martino Luigi Di Salvo, Roberto Contestabile, Stefano Pascarella
Data Brief. 2016 Dec; 9: 292–313. Published online 2016 Sep 5. doi: 10.1016/j.dib.2016.08.064
PMCID:
PMC5026710
AbstractArticlePDF–4.5M
16.
NCBI prokaryotic genome annotation pipeline
Tatiana Tatusova, Michael DiCuccio, Azat Badretdin, Vyacheslav Chetvernin, Eric P. Nawrocki, Leonid Zaslavsky, Alexandre Lomsadze, Kim D. Pruitt, Mark Borodovsky, James Ostell
Nucleic Acids Res. 2016 Aug 19; 44(14): 6614–6624. Published online 2016 Jun 24. doi: 10.1093/nar/gkw569
PMCID:
PMC5001611
AbstractArticlePDF–2.6M
17.
Identification of DNA Methyltransferase Genes in Human Pathogenic Bacteria by Comparative Genomics
Aniel Jessica Leticia Brambila-Tapia, Augusto Cesar Poot-Hernández, Ernesto Perez-Rueda, Katya Rodríguez-Vázquez
Indian J Microbiol. 2016 Jun; 56(2): 134–141. Published online 2015 Dec 31. doi: 10.1007/s12088-015-0562-4
PMCID:
PMC4984436
AbstractArticlePDF–502K
18.
Enhancement of DNaseI Salt Tolerance by Mimicking the Domain Structure of DNase from an Extremely Halotolerant Bacterium Thioalkalivibrio sp. K90mix
Gediminas Alzbutas, Milda Kaniusaite, Arunas Lagunavicius
PLoS One. 2016; 11(3): e0150404. Published online 2016 Mar 3. doi: 10.1371/journal.pone.0150404
PMCID:
PMC4777378
AbstractArticlePDF–3.7M
19.
Relationship between digital information and thermodynamic stability in bacterial genomes
Dawit Nigatu, Werner Henkel, Patrick Sobetzko, Georgi Muskhelishvili
EURASIP J Bioinform Syst Biol. 2016 Dec; 2016: 4. Published online 2016 Feb 2. doi: 10.1186/s13637-016-0037-x
PMCID:
PMC4740571
AbstractArticlePDF–1.1M
20.
Exploring the microbiota dynamics related to vegetable biomasses degradation and study of lignocellulose-degrading bacteria for industrial biotechnological application
Valeria Ventorino, Alberto Aliberti, Vincenza Faraco, Alessandro Robertiello, Simona Giacobbe, Danilo Ercolini, Antonella Amore, Massimo Fagnano, Olimpia Pepe
Sci Rep. 2015; 5: 8161. Published online 2015 Feb 2. doi: 10.1038/srep08161
PMCID:
PMC4648445
AbstractArticlePDF–2.6M

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