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Select item 69402841.

Bacterial Community Sequences of Submerged Aquatic Vegetation in the Potomac River

Alexandra Alexiev, Laura E. Vann, Jenna M. Lang, Jonathan A. Eisen

Microbiol Resour Announc. 2020 Jan; 9(1): e01175-19. Published online 2020 Jan 2. doi: 10.1128/MRA.01175-19

PMCID:: PMC6940284

Abstract Article PDF–128K

Select item 68908232.

Elemental Sulfur Formation by Sulfuricurvum kujiense Is Mediated by Extracellular Organic Compounds

Brandi Cron, Pauline Henri, Clara S. Chan, Jennifer L. Macalady, Julie Cosmidis

Front Microbiol. 2019; 10: 2710. Published online 2019 Nov 27. doi: 10.3389/fmicb.2019.02710

PMCID:: PMC6890823

Abstract Article PDF–4.5M

Select item 66759813.

Metagenome-Assembled Genome Sequence of Sulfuricurvum sp. Strain IAE1, Isolated from a 4-Chlorophenol-Degrading Consortium

Xiuying Li, Yi Yang, Xiangfeng Zeng, Jingjing Wang, Huijuan Jin, Zhi Sheng, Jun Yan

Microbiol Resour Announc. 2019 Aug; 8(31): e00296-19. Published online 2019 Aug 1. doi: 10.1128/MRA.00296-19

PMCID:: PMC6675981

Abstract Article PDF–136K

Select item 66142894.

Exploring Biodiversity and Arsenic Metabolism of Microbiota Inhabiting Arsenic-Rich Groundwaters in Northern Italy

Lucia Cavalca, Sarah Zecchin, Patrizia Zaccheo, Ben Abbas, Marco Rotiroti, Tullia Bonomi, Gerard Muyzer

Front Microbiol. 2019; 10: 1480. Published online 2019 Jul 2. doi: 10.3389/fmicb.2019.01480

PMCID:: PMC6614289

Abstract Article PDF–1.5M

Select item 59869475.

nifPred: Proteome-Wide Identification and Categorization of Nitrogen-Fixation Proteins of Diaztrophs Based on Composition-Transition-Distribution Features Using Support Vector Machine

Prabina K. Meher, Tanmaya K. Sahu, Jyotilipsa Mohanty, Shachi Gahoi, Supriya Purru, Monendra Grover, Atmakuri R. Rao

Front Microbiol. 2018; 9: 1100. Published online 2018 May 29. doi: 10.3389/fmicb.2018.01100

PMCID:: PMC5986947

Abstract Article PDF–3.1M

Select item 57329456.

Phylogenetic Structure and Metabolic Properties of Microbial Communities in Arsenic-Rich Waters of Geothermal Origin

Simona Crognale, Sarah Zecchin, Stefano Amalfitano, Stefano Fazi, Barbara Casentini, Anna Corsini, Lucia Cavalca, Simona Rossetti

Front Microbiol. 2017; 8: 2468. Published online 2017 Dec 12. doi: 10.3389/fmicb.2017.02468

PMCID:: PMC5732945

Abstract Article PDF–3.2M

Select item 55998807.

Profiling bacterial communities by MinION sequencing of ribosomal operons

Lee J. Kerkhof, Kevin P. Dillon, Max M. Häggblom, Lora R. McGuinness

Microbiome. 2017; 5: 116. Published online 2017 Sep 15. doi: 10.1186/s40168-017-0336-9

PMCID:: PMC5599880

Abstract Article PDF–2.5M

Select item 55923988.

Efficacies of Various Anaerobic Starter Seeds for Biogas Production from Different Types of Wastewater

Pawinee Chaiprasert, Nasrul Hudayah, Chompoonut Auphimai

Biomed Res Int. 2017; 2017: 2782850. Published online 2017 Aug 28. doi: 10.1155/2017/2782850

PMCID:: PMC5592398

Abstract Article PDF–1.1M

Select item 54381869.

Genomic and transcriptomic analyses reveal adaptation mechanisms of an Acidithiobacillus ferrivorans strain YL15 to alpine acid mine drainage

Tangjian Peng, Liyuan Ma, Xue Feng, Jiemeng Tao, Meihua Nan, Yuandong Liu, Jiaokun Li, Li Shen, Xueling Wu, Runlan Yu, Xueduan Liu, Guanzhou Qiu, Weimin Zeng

PLoS One. 2017; 12(5): e0178008. Published online 2017 May 19. doi: 10.1371/journal.pone.0178008

PMCID:: PMC5438186

Abstract Article PDF–2.4M

Select item 532255310.

Environmental Selection Pressures Related to Iron Utilization Are Involved in the Loss of the Flavodoxin Gene from the Plant Genome

Juan J. Pierella Karlusich, Romina D. Ceccoli, Martín Graña, Héctor Romero, Néstor Carrillo

Genome Biol Evol. 2015 Mar; 7(3): 750–767. Published online 2015 Feb 16. doi: 10.1093/gbe/evv031

PMCID:: PMC5322553

Abstract Article PDF–1.3M

Select item 515666611.

Integrated Anaerobic-Aerobic Biodegradation of Multiple Contaminants Including Chlorinated Ethylenes, Benzene, Toluene, and Dichloromethane

Miho Yoshikawa, Ming Zhang, Koki Toyota

Water Air Soil Pollut. 2017; 228(1): 25. Published online 2016 Dec 14. doi: 10.1007/s11270-016-3216-1

PMCID:: PMC5156666

Abstract Article PDF–787K

Select item 513702512.

Regional variations in the diversity and predicted metabolic potential of benthic prokaryotes in coastal northern Zhejiang, East China Sea

Kai Wang, Xiansen Ye, Huajun Zhang, Heping Chen, Demin Zhang, Lian Liu

Sci Rep. 2016; 6: 38709. Published online 2016 Dec 5. doi: 10.1038/srep38709

PMCID:: PMC5137025

Abstract Article PDF–1.5M

Select item 506184913.

Photosynthetic Versatility in the Genome of Geitlerinema sp. PCC 9228 (Formerly Oscillatoria limnetica ‘Solar Lake’), a Model Anoxygenic Photosynthetic Cyanobacterium

Sharon L. Grim, Gregory J. Dick

Front Microbiol. 2016; 7: 1546. Published online 2016 Oct 13. doi: 10.3389/fmicb.2016.01546

PMCID:: PMC5061849

Abstract Article PDF–2.2M

Select item 502917114.

Coupled RNA-SIP and metatranscriptomics of active chemolithoautotrophic communities at a deep-sea hydrothermal vent

Caroline S Fortunato, Julie A Huber

ISME J. 2016 Aug; 10(8): 1925–1938. Published online 2016 Feb 12. doi: 10.1038/ismej.2015.258

PMCID:: PMC5029171

Abstract Article PDF–2.3M

Select item 496874115.

The novel regulatory ncRNA, NfiS, optimizes nitrogen fixation via base pairing with the nitrogenase gene nifK mRNA in Pseudomonas stutzeri A1501

Yuhua Zhan, Yongliang Yan, Zhiping Deng, Ming Chen, Wei Lu, Chao Lu, Liguo Shang, Zhimin Yang, Wei Zhang, Wei Wang, Yun Li, Qi Ke, Jiasi Lu, Yuquan Xu, Liwen Zhang, Zhihong Xie, Qi Cheng, Claudine Elmerich, Min Lin

Proc Natl Acad Sci U S A. 2016 Jul 26; 113(30): E4348–E4356. Published online 2016 Jul 12. doi: 10.1073/pnas.1604514113

PMCID:: PMC4968741

Abstract Article PDF–1.7M

Select item 478228616.

Recovering complete and draft population genomes from metagenome datasets

Naseer Sangwan, Fangfang Xia, Jack A. Gilbert

Microbiome. 2016; 4: 8. Published online 2016 Mar 8. doi: 10.1186/s40168-016-0154-5

PMCID:: PMC4782286

Abstract Article PDF–720K

Select item 474484617.

Hydrogenase Gene Distribution and H₂ Consumption Ability within the Thiomicrospira Lineage

Moritz Hansen, Mirjam Perner

Front Microbiol. 2016; 7: 99. Published online 2016 Feb 8. doi: 10.3389/fmicb.2016.00099

PMCID:: PMC4744846

Abstract Article PDF–3.6M

Select item 467456418.

Metagenome-Based Metabolic Reconstruction Reveals the Ecophysiological Function of Epsilonproteobacteria in a Hydrocarbon-Contaminated Sulfidic Aquifer

Andreas H. Keller, Kathleen M. Schleinitz, Robert Starke, Stefan Bertilsson, Carsten Vogt, Sabine Kleinsteuber

Front Microbiol. 2015; 6: 1396. Published online 2015 Dec 10. doi: 10.3389/fmicb.2015.01396

PMCID:: PMC4674564

Abstract Article PDF–1.3M

Select item 462042019.

Geomicrobiology of sublacustrine thermal vents in Yellowstone Lake: geochemical controls on microbial community structure and function

William P. Inskeep, Zackary J. Jay, Richard E. Macur, Scott Clingenpeel, Aaron Tenney, David Lovalvo, Jacob P. Beam, Mark A. Kozubal, W. C. Shanks, Lisa A. Morgan, Jinjun Kan, Yuri Gorby, Shibu Yooseph, Kenneth Nealson

Front Microbiol. 2015; 6: 1044. Published online 2015 Oct 26. doi: 10.3389/fmicb.2015.01044