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Items: 20

1.
Isotope Fractionation Pinpoints Membrane Permeability as a Barrier to Atrazine Biodegradation in Gram-negative Polaromonas sp. Nea-C
Benno N. Ehrl, Mehdi Gharasoo, Martin Elsner
Environ Sci Technol. 2018 Apr 3; 52(7): 4137–4144. Published online 2018 Mar 2. doi: 10.1021/acs.est.7b06599
PMCID:
PMC6331012
AbstractArticlePDF–1.5M
2.
Understanding and Designing the Strategies for the Microbe-Mediated Remediation of Environmental Contaminants Using Omics Approaches
Muneer A. Malla, Anamika Dubey, Shweta Yadav, Ashwani Kumar, Abeer Hashem, Elsayed Fathi Abd_Allah
Front Microbiol. 2018; 9: 1132. Published online 2018 Jun 4. doi: 10.3389/fmicb.2018.01132
PMCID:
PMC5994547
AbstractArticlePDF–6.6M
3.
Changes of the Bacterial Abundance and Communities in Shallow Ice Cores from Dunde and Muztagata Glaciers, Western China
Yong Chen, Xiang-Kai Li, Jing Si, Guang-Jian Wu, Li-De Tian, Shu-Rong Xiang
Front Microbiol. 2016; 7: 1716. Published online 2016 Nov 1. doi: 10.3389/fmicb.2016.01716
PMCID:
PMC5088206
AbstractArticlePDF–4.7M
4.
Data from computational analysis of the peptide linkers in the MocR bacterial transcriptional regulators
Sebastiana Angelaccio, Teresa Milano, Angela Tramonti, Martino Luigi Di Salvo, Roberto Contestabile, Stefano Pascarella
Data Brief. 2016 Dec; 9: 292–313. Published online 2016 Sep 5. doi: 10.1016/j.dib.2016.08.064
PMCID:
PMC5026710
AbstractArticlePDF–4.5M
5.
Transcriptional Modulation of Intestinal Innate Defense/Inflammation Genes by Preterm Infant Microbiota in a Humanized Gnotobiotic Mouse Model
Lei Lu, Yueyue Yu, Yuee Guo, Yunwei Wang, Eugene B. Chang, Erika C. Claud
PLoS One. 2015; 10(4): e0124504. Published online 2015 Apr 30. doi: 10.1371/journal.pone.0124504
PMCID:
PMC4415773
AbstractArticlePDF–1.5M
6.
Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms
Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés
Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869
PMCID:
PMC3927607
AbstractArticlePDF–2.0M
7.
Evolutionary diversification and characterization of the eubacterial gene family encoding DXR type II, an alternative isoprenoid biosynthetic enzyme
Lorenzo Carretero-Paulet, Agnieszka Lipska, Jordi Pérez-Gil, Félix J Sangari, Victor A Albert, Manuel Rodríguez-Concepción
BMC Evol Biol. 2013; 13: 180. Published online 2013 Sep 3. doi: 10.1186/1471-2148-13-180
PMCID:
PMC3847144
AbstractArticlePDF–1.9M
8.
Metagenome reveals potential microbial degradation of hydrocarbon coupled with sulfate reduction in an oil-immersed chimney from Guaymas Basin
Ying He, Xiang Xiao, Fengping Wang
Front Microbiol. 2013; 4: 148. Published online 2013 Jun 14. doi: 10.3389/fmicb.2013.00148
PMCID:
PMC3682177
AbstractArticlePDF–2.0M
9.
Identification of Bacterial Protein O-Oligosaccharyltransferases and Their Glycoprotein Substrates
Benjamin L. Schulz, Freda E. C. Jen, Peter M. Power, Christopher E. Jones, Kate L. Fox, Shan C. Ku, Joanne T. Blanchfield, Michael P. Jennings
PLoS One. 2013; 8(5): e62768. Published online 2013 May 3. doi: 10.1371/journal.pone.0062768
PMCID:
PMC3643930
AbstractArticlePDF–1.9M
10.
Novel B12-dependent Acyl-CoA Mutases and their Biotechnological Potential
Cracan Valentin, Ruma Banerjee
Biochemistry. Author manuscript; available in PMC 2013 Aug 7.
Published in final edited form as: Biochemistry. 2012 Aug 7; 51(31): 6039–6046. Published online 2012 Jul 23. doi: 10.1021/bi300827v
PMCID:
PMC3448797
AbstractArticlePDF–2.5M
11.
Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
Chengwei Luo, Despina Tsementzi, Nikos Kyrpides, Timothy Read, Konstantinos T. Konstantinidis
PLoS One. 2012; 7(2): e30087. Published online 2012 Feb 10. doi: 10.1371/journal.pone.0030087
Correction in:
PLoS One. 2012; 7(3): 10.1371/annotation/64ba358f-a483-46c2-b224-eaa5b9a33939.
PMCID:
PMC3277595
AbstractArticlePDF–1.5M
12.
Detection of small RNAs in Bordetella pertussis and identification of a novel repeated genetic element
David Hot, Stéphanie Slupek, Bérénice Wulbrecht, Anthony D'Hondt, Christine Hubans, Rudy Antoine, Camille Locht, Yves Lemoine
BMC Genomics. 2011; 12: 207. Published online 2011 Apr 27. doi: 10.1186/1471-2164-12-207
PMCID:
PMC3110155
AbstractArticlePDF–9.2M
13.
Is protein classification necessary? Towards alternative approaches to function annotation
Donald Petrey, Barry Honig
Curr Opin Struct Biol. Author manuscript; available in PMC 2009 Dec 1.
Published in final edited form as: Curr Opin Struct Biol. 2009 Jun; 19(3): 363–368. Published online 2009 Mar 5. doi: 10.1016/j.sbi.2009.02.001
PMCID:
PMC2745633
AbstractArticlePDF–380K
14.
Selecting Folded Proteins from a Library of Secondary Structural Elements
James J. Graziano, Wenshe Liu, Roshan Perera, Bernhard H. Geierstanger, Scott A. Lesley, Peter G. Schultz
J Am Chem Soc. Author manuscript; available in PMC 2009 Jul 23.
Published in final edited form as: J Am Chem Soc. 2008 Jan 9; 130(1): 176–185. Published online 2007 Dec 8. doi: 10.1021/ja074405w
PMCID:
PMC2714538
AbstractArticlePDF–1.0M
15.
Molecular signature of hypersaline adaptation: insights from genome and proteome composition of halophilic prokaryotes
Sandip Paul, Sumit K Bag, Sabyasachi Das, Eric T Harvill, Chitra Dutta
Genome Biol. 2008; 9(4): R70. Published online 2008 Apr 9. doi: 10.1186/gb-2008-9-4-r70
PMCID:
PMC2643941
AbstractArticlePDF–1.9M
16.
A Streamlined Metabolic Pathway For the Biosynthesis of Moenomycin A
Bohdan Ostash, Alan Saghatelian, Suzanne Walker
Chem Biol. Author manuscript; available in PMC 2007 Aug 1.
Published in final edited form as: Chem Biol. 2007 Mar; 14(3): 257–267. doi: 10.1016/j.chembiol.2007.01.008
PMCID:
PMC1936435
AbstractArticlePDF–515K
17.
Crystal Structure of Bacillus cereus HlyIIR, a Transcriptional Regulator of the Gene for Pore-forming Toxin Hemolysin II
Oleg V. Kovalevskiy, Andrey A. Lebedev, Alexei K. Surin, Alexander S. Solonin, Alfred A. Antson
J Mol Biol. 2007 Jan 19; 365(3): 825–834. doi: 10.1016/j.jmb.2006.10.074
PMCID:
PMC1828608
AbstractArticle
18.
Comparative salivary gland transcriptomics of sandfly vectors of visceral leishmaniasis
Jennifer M Anderson, Fabiano Oliveira, Shaden Kamhawi, Ben J Mans, David Reynoso, Amy E Seitz, Phillip Lawyer, Mark Garfield, MyVan Pham, Jesus G Valenzuela
BMC Genomics. 2006; 7: 52. Published online 2006 Mar 15. doi: 10.1186/1471-2164-7-52
PMCID:
PMC1434747
AbstractArticlePDF–1.2M
19.
Comparative genomic analysis reveals a novel mitochondrial isoform of human rTS protein and unusual phylogenetic distribution of the rTS gene
Ping Liang, Jayakumar R Nair, Lei Song, John J McGuire, Bruce J Dolnick
BMC Genomics. 2005; 6: 125. Published online 2005 Sep 14. doi: 10.1186/1471-2164-6-125
PMCID:
PMC1261261
AbstractArticlePDF–622K
20.
Signature proteins that are distinctive of alpha proteobacteria
Pinay Kainth, Radhey S Gupta
BMC Genomics. 2005; 6: 94. Published online 2005 Jun 16. doi: 10.1186/1471-2164-6-94
PMCID:
PMC1182365
AbstractArticlePDF–403K

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