PMC Links for Taxonomy (Select 272560) - PMC

Result Filters

Links from Taxonomy

Items: 17

Select item 68314211.

Whole genome sequencing analysis of a dexamethasone-degrading Burkholderia strain CQ001

Dan Si, Yuxia Xiong, Zhibang Yang, Jin Zhang, Lianju Ma, Jinyang Li, Yi Wang

Medicine (Baltimore) 2019 Aug; 98(33): e16749. Published online 2019 Aug 16. doi: 10.1097/MD.0000000000016749

PMCID:: PMC6831421

Abstract Article PDF–1.3M

Select item 62835982.

Metabolic models and gene essentiality data reveal essential and conserved metabolism in prokaryotes

Joana C. Xavier, Kiran Raosaheb Patil, Isabel Rocha

PLoS Comput Biol. 2018 Nov; 14(11): e1006556. Published online 2018 Nov 16. doi: 10.1371/journal.pcbi.1006556

PMCID:: PMC6283598

Abstract Article PDF–3.4M

Select item 56106893.

Microbial Community and Functional Gene Changes in Arctic Tundra Soils in a Microcosm Warming Experiment

Ziming Yang, Sihang Yang, Joy D. Van Nostrand, Jizhong Zhou, Wei Fang, Qi Qi, Yurong Liu, Stan D. Wullschleger, Liyuan Liang, David E. Graham, Yunfeng Yang, Baohua Gu

Front Microbiol. 2017; 8: 1741. Published online 2017 Sep 19. doi: 10.3389/fmicb.2017.01741

PMCID:: PMC5610689

Abstract Article PDF–997K

Select item 55910064.

Assigning ecological roles to the populations belonging to a phenanthrene-degrading bacterial consortium using omic approaches

Sabrina Festa, Bibiana Marina Coppotelli, Laura Madueño, Claudia Lorena Loviso, Marianela Macchi, Ricardo Martin Neme Tauil, María Pía Valacco, Irma Susana Morelli

PLoS One. 2017; 12(9): e0184505. Published online 2017 Sep 8. doi: 10.1371/journal.pone.0184505

PMCID:: PMC5591006

Abstract Article PDF–3.5M

Select item 51353335.

Evolutionary switches between two serine codon sets are driven by selection

Igor B. Rogozin, Frida Belinky, Vladimir Pavlenko, Svetlana A. Shabalina, David M. Kristensen, Eugene V. Koonin

Proc Natl Acad Sci U S A. 2016 Nov 15; 113(46): 13109–13113. Published online 2016 Oct 31. doi: 10.1073/pnas.1615832113

PMCID:: PMC5135333

Abstract Article PDF–880K

Select item 39370576.

Mining locus tags in PubMed Central to improve microbial gene annotation

Chris J Stubben, Jean F Challacombe

BMC Bioinformatics. 2014; 15: 43. Published online 2014 Feb 5. doi: 10.1186/1471-2105-15-43

PMCID:: PMC3937057

Abstract Article PDF–421K

Select item 39276077.

Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms

Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés

Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869

PMCID:: PMC3927607

Abstract Article PDF–2.0M

Select item 31726138.

Mycobacterium tuberculosis Rv0899 defines a family of membrane proteins widespread in nitrogen-fixing bacteria

Francesca M. Marassi

Proteins. Author manuscript; available in PMC 2012 Oct 1.

Published in final edited form as: Proteins. 2011 Oct; 79(10): 2946–2955. Published online 2011 Aug 26. doi: 10.1002/prot.23151

PMCID:: PMC3172613

Abstract Article PDF–2.7M

Select item 30701819.

Computational Protein Design and Large-Scale Assessment by I-TASSER Structure Assembly Simulations

Andrea Bazzoli, Andrea G. B. Tettamanzi, Yang Zhang

J Mol Biol. Author manuscript; available in PMC 2012 Apr 15.

Published in final edited form as: J Mol Biol. 2011 Apr 15; 407(5): 764–776. Published online 2011 Feb 15. doi: 10.1016/j.jmb.2011.02.017

PMCID:: PMC3070181

Abstract Article PDF–1.6M

Select item 278182710.

The effect of sequencing errors on metagenomic gene prediction

Katharina J Hoff

BMC Genomics. 2009; 10: 520. Published online 2009 Nov 12. doi: 10.1186/1471-2164-10-520

PMCID:: PMC2781827

Abstract Article PDF–285K

Select item 277037111.

Genomic Target Database (GTD): A database of potential targets in human pathogenic bacteria

Debmalya Barh, Anil Kumar, Amarendra Narayana Misra

Bioinformation. 2009; 4(1): 50–51. Published online 2009 Aug 17. doi: 10.6026/97320630004050

PMCID:: PMC2770371

Abstract Article PDF–94K

Select item 209944412.

Separating the effects of mutation and selection in producing DNA skew in bacterial chromosomes

Richard A Morton, Brian R Morton

BMC Genomics. 2007; 8: 369. Published online 2007 Oct 12. doi: 10.1186/1471-2164-8-369

PMCID:: PMC2099444

Abstract Article PDF–1.1M

Select item 207536513.

Identification of Prophages in Bacterial Genomes by Dinucleotide Relative Abundance Difference

K. V. Srividhya, V. Alaguraj, G. Poornima, Dinesh Kumar, G. P. Singh, L. Raghavenderan, A. V. S. K. Mohan Katta, Preeti Mehta, S. Krishnaswamy

PLoS One. 2007; 2(11): e1193. Published online 2007 Nov 21. doi: 10.1371/journal.pone.0001193

PMCID:: PMC2075365

Abstract Article PDF–295K

Select item 185231614.

Transcriptional regulatory network discovery via multiple method integration: application to e. coli K12

Jingjun Sun, Kagan Tuncay, Alaa Abi Haidar, Lisa Ensman, Frank Stanley, Michael Trelinski, Peter Ortoleva

Algorithms Mol Biol. 2007; 2: 2. Published online 2007 Mar 30. doi: 10.1186/1748-7188-2-2

PMCID:: PMC1852316

Abstract Article PDF–707K

Select item 165703515.

Using the nucleotide substitution rate matrix to detect horizontal gene transfer

Micah Hamady, M D Betterton, Rob Knight

BMC Bioinformatics. 2006; 7: 476. Published online 2006 Oct 26. doi: 10.1186/1471-2105-7-476

PMCID:: PMC1657035

Abstract Article PDF–1.0M

Select item 163649816.

MetaGene: prokaryotic gene finding from environmental genome shotgun sequences

Hideki Noguchi, Jungho Park, Toshihisa Takagi

Nucleic Acids Res. 2006 Nov; 34(19): 5623–5630. Published online 2006 Oct 5. doi: 10.1093/nar/gkl723

PMCID:: PMC1636498

Abstract Article PDF–407K

Select item 143593917.

Domain-based small molecule binding site annotation

Kevin A Snyder, Howard J Feldman, Michel Dumontier, John J Salama, Christopher WV Hogue

BMC Bioinformatics. 2006; 7: 152. Published online 2006 Mar 17. doi: 10.1186/1471-2105-7-152

PMCID:: PMC1435939

Abstract Article PDF–2.0M

Supplemental Content

Filter your results:

All (17)
NIH grants (3)
Embargoed (0)

Manage Filters

Find related data

Recent activity

Clear Turn Off Turn On

PMC Links for Taxonomy (Select 272560) (17)
PMC

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

You are here: NCBI > Literature > PubMed Central (PMC)

Support Center

PMC

Result Filters

Article attributes

Text availability

Publication date

Custom date range

Research Funder

Additional filters

Display Settings:

Send to: