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Select item 65088711.

Dual RNA-Seq of Human Leprosy Lesions Identifies Bacterial Determinants Linked to Host Immune Response

Dennis J. Montoya, Priscila Andrade, Bruno J.A. Silva, Rosane M.B. Teles, Feiyang Ma, Bryan Bryson, Saheli Sadanand, Teia Noel, Jing Lu, Euzenir Sarno, Kristine B. Arnvig, Douglas Young, Ramanuj Lahiri, Diana L. Williams, Sarah Fortune, Barry R. Bloom, Matteo Pellegrini, Robert L. Modlin

Cell Rep. Author manuscript; available in PMC 2019 May 9.

Published in final edited form as: Cell Rep. 2019 Mar 26; 26(13): 3574–3585.e3. doi: 10.1016/j.celrep.2019.02.109

PMCID:: PMC6508871

Abstract Article PDF–1.8M

Select item 61528622.

Evaluation of antigen-specific immune responses for leprosy diagnosis in a hyperendemic area in China

Xiaohua Chen, Yuan-Gang You, You-Hua Yuan, Lian Chao Yuan, Ying Zhang, Wen Yan

PLoS Negl Trop Dis. 2018 Sep; 12(9): e0006777. Published online 2018 Sep 24. doi: 10.1371/journal.pntd.0006777

PMCID:: PMC6152862

Abstract Article PDF–2.8M

Select item 59830113.

DACCOR–Detection, characterization, and reconstruction of repetitive regions in bacterial genomes

Alexander Seitz, Friederike Hanssen, Kay Nieselt

PeerJ. 2018; 6: e4742. Published online 2018 May 29. doi: 10.7717/peerj.4742

PMCID:: PMC5983011

Abstract Article PDF–1.1M

Select item 53845684.

Improving ancient DNA genome assembly

Alexander Seitz, Kay Nieselt

PeerJ. 2017; 5: e3126. Published online 2017 Apr 5. doi: 10.7717/peerj.3126

PMCID:: PMC5384568

Abstract Article PDF–630K

Select item 40414205.

Auxiliary tRNAs: large-scale analysis of tRNA genes reveals patterns of tRNA repertoire dynamics

Naama Wald, Hanah Margalit

Nucleic Acids Res. 2014 Jun 1; 42(10): 6552–6566. Published online 2014 Apr 29. doi: 10.1093/nar/gku245

PMCID:: PMC4041420

Abstract Article PDF–2.7M

Select item 39880126.

MP3: A Software Tool for the Prediction of Pathogenic Proteins in Genomic and Metagenomic Data

Ankit Gupta, Rohan Kapil, Darshan B. Dhakan, Vineet K. Sharma

PLoS One. 2014; 9(4): e93907. Published online 2014 Apr 15. doi: 10.1371/journal.pone.0093907

PMCID:: PMC3988012

Abstract Article PDF–334K

Select item 39588237.

Exploring the Molecular Basis for Selective Binding of Homoserine Dehydrogenase from Mycobacterium leprae TN toward Inhibitors: A Virtual Screening Study

Dongling Zhan, Dongmei Wang, Weihong Min, Weiwei Han

Int J Mol Sci. 2014 Feb; 15(2): 1826–1841. Published online 2014 Jan 24. doi: 10.3390/ijms15021826

PMCID:: PMC3958823

Abstract Article PDF–1.2M

Select item 39276078.

Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms

Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés

Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869

PMCID:: PMC3927607

Abstract Article PDF–2.0M

Select item 37924079.

Overexpression of chloroplast NADPH-dependent thioredoxin reductase in Arabidopsis enhances leaf growth and elucidates in vivo function of reductase and thioredoxin domains

Jouni Toivola, Lauri Nikkanen, Käthe M. Dahlström, Tiina A. Salminen, Anna Lepistö, hb Florence Vignols, Eevi Rintamäki

Front Plant Sci. 2013; 4: 389. Published online 2013 Oct 8. doi: 10.3389/fpls.2013.00389

PMCID:: PMC3792407

Abstract Article PDF–3.7M

Select item 372830310.

The Embedding Problem for Markov Models of Nucleotide Substitution

Klara L. Verbyla, Von Bing Yap, Anuj Pahwa, Yunli Shao, Gavin A. Huttley

PLoS One. 2013; 8(7): e69187. Published online 2013 Jul 30. doi: 10.1371/journal.pone.0069187

PMCID:: PMC3728303

Abstract Article PDF–501K

Select item 350457611.

Computational genomics-proteomics and Phylogeny analysis of twenty one mycobacterial genomes (Tuberculosis & non Tuberculosis strains)

Fathiah Zakham, Othmane Aouane, David Ussery, Abdelaziz Benjouad, Moulay Mustapha Ennaji

Microb Inform Exp. 2012; 2: 7. Published online 2012 Aug 28. doi: 10.1186/2042-5783-2-7

PMCID:: PMC3504576

Abstract Article PDF–1.2M

Select item 338801212.

Comparative analysis of mycobacterium and related actinomycetes yields insight into the evolution of mycobacterium tuberculosis pathogenesis

Abigail Manson McGuire, Brian Weiner, Sang Tae Park, Ilan Wapinski, Sahadevan Raman, Gregory Dolganov, Matthew Peterson, Robert Riley, Jeremy Zucker, Thomas Abeel, Jared White, Peter Sisk, Christian Stolte, Mike Koehrsen, Robert T Yamamoto, Milena Iacobelli-Martinez, Matthew J Kidd, Andreia M Maer, Gary K Schoolnik, Aviv Regev, James Galagan

BMC Genomics. 2012; 13: 120. Published online 2012 Mar 28. doi: 10.1186/1471-2164-13-120