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Links from Taxonomy

Items: 1 to 20 of 92

1.
Cyclic nucleotides in archaea: Cyclic di‐AMP in the archaeon Haloferax volcanii and its putative role
Frank Braun, Laura Thomalla, Chris van der Does, Tessa E. F. Quax, Thorsten Allers, Volkhard Kaever, Sonja‐Verena Albers
Microbiologyopen. 2019 Sep; 8(9): e00829. Published online 2019 Mar 18. doi: 10.1002/mbo3.829
PMCID:
PMC6741144
AbstractArticlePDF–2.5M
2.
The TK0271 Protein Activates Transcription of Aromatic Amino Acid Biosynthesis Genes in the Hyperthermophilic Archaeon Thermococcus kodakarensis
Yasuyuki Yamamoto, Tamotsu Kanai, Tsuyoshi Kaneseki, Haruyuki Atomi
mBio. 2019 Sep-Oct; 10(5): e01213-19. Published online 2019 Sep 10. doi: 10.1128/mBio.01213-19
PMCID:
PMC6737238
AbstractArticlePDF–2.0M
3.
Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi
Joel A. Boyd, Sean P. Jungbluth, Andy O. Leu, Paul N. Evans, Ben J. Woodcroft, Grayson L. Chadwick, Victoria J. Orphan, Jan P. Amend, Michael S. Rappé, Gene W. Tyson
ISME J. 2019 May; 13(5): 1269–1279. Published online 2019 Jan 16. doi: 10.1038/s41396-018-0343-2
PMCID:
PMC6474303
AbstractArticlePDF–2.1M
4.
Phylogenetic-scale disparities in the soil microbial diversity–ecosystem functioning relationship
Marta Goberna, Miguel Verdú
ISME J. 2018 Sep; 12(9): 2152–2162. Published online 2018 Jun 7. doi: 10.1038/s41396-018-0162-5
PMCID:
PMC6092336
AbstractArticlePDF–867K
5.
Origin and Evolution of Flavin-Based Electron Bifurcating Enzymes
Saroj Poudel, Eric C. Dunham, Melody R. Lindsay, Maximiliano J. Amenabar, Elizabeth M. Fones, Daniel R. Colman, Eric S. Boyd
Front Microbiol. 2018; 9: 1762. Published online 2018 Aug 3. doi: 10.3389/fmicb.2018.01762
PMCID:
PMC6085437
AbstractArticlePDF–3.4M
6.
Genomic inference of the metabolism and evolution of the archaeal phylum Aigarchaeota
Zheng-Shuang Hua, Yan-Ni Qu, Qiyun Zhu, En-Min Zhou, Yan-Ling Qi, Yi-Rui Yin, Yang-Zhi Rao, Ye Tian, Yu-Xian Li, Lan Liu, Cindy J. Castelle, Brian P. Hedlund, Wen-Sheng Shu, Rob Knight, Wen-Jun Li
Nat Commun. 2018; 9: 2832. Published online 2018 Jul 19. doi: 10.1038/s41467-018-05284-4
PMCID:
PMC6053391
AbstractArticlePDF–3.6M
7.
TPV1, the first virus isolated from the hyperthermophilic genus Thermococcus
Aurore Gorlas, Eugene V. Koonin, Nadège Bienvenu, Daniel Prieur, Claire Geslin
Environ Microbiol. Author manuscript; available in PMC 2018 May 4.
Published in final edited form as: Environ Microbiol. 2012 Feb; 14(2): 503–516. Published online 2011 Dec 12. doi: 10.1111/j.1462-2920.2011.02662.x
PMCID:
PMC5935114
AbstractArticlePDF–632K
8.
Comparative genomic analysis of evolutionarily conserved but functionally uncharacterized membrane proteins in archaea: Prediction of novel components of secretion, membrane remodeling and glycosylation systems
Kira S. Makarova, Michael Y. Galperin, Eugene V. Koonin
Biochimie. Author manuscript; available in PMC 2018 Apr 13.
Published in final edited form as: Biochimie. 2015 Nov; 118: 302–312. Published online 2015 Jan 9. doi: 10.1016/j.biochi.2015.01.004
PMCID:
PMC5898192
AbstractArticlePDF–1008K
9.
Sulfate Transporters in Dissimilatory Sulfate Reducing Microorganisms: A Comparative Genomics Analysis
Angeliki Marietou, Hans Røy, Bo B. Jørgensen, Kasper U. Kjeldsen
Front Microbiol. 2018; 9: 309. Published online 2018 Mar 2. doi: 10.3389/fmicb.2018.00309
PMCID:
PMC5840216
AbstractArticlePDF–6.5M
10.
Rice Paddy Nitrospirae Carry and Express Genes Related to Sulfate Respiration: Proposal of the New Genus “Candidatus Sulfobium”
Sarah Zecchin, Ralf C. Mueller, Jana Seifert, Ulrich Stingl, Karthik Anantharaman, Martin von Bergen, Lucia Cavalca, Michael Pester
Appl Environ Microbiol. 2018 Mar 1; 84(5): e02224-17. Prepublished online 2017 Dec 15. Published online 2018 Feb 14. doi: 10.1128/AEM.02224-17
PMCID:
PMC5812927
AbstractArticlePDF–2.5M
11.
Core promoter information content correlates with optimal growth temperature
Ariel A. Aptekmann, Alejandro D. Nadra
Sci Rep. 2018; 8: 1313. Published online 2018 Jan 22. doi: 10.1038/s41598-018-19495-8
PMCID:
PMC5777992
AbstractArticlePDF–1.1M
12.
Complete genome sequence analysis of Archaeoglobus fulgidus strain 7324 (DSM 8774), a hyperthermophilic archaeal sulfate reducer from a North Sea oil field
Nils-Kåre Birkeland, Peter Schönheit, Lianna Poghosyan, Anne Fiebig, Hans-Peter Klenk
Stand Genomic Sci. 2017; 12: 79. Published online 2017 Dec 16. doi: 10.1186/s40793-017-0296-5
PMCID:
PMC5732400
AbstractArticlePDF–1.3M
13.
Recent Developments for Remediating Acidic Mine Waters Using Sulfidogenic Bacteria
Ivan Nancucheo, José A. P. Bitencourt, Prafulla K. Sahoo, Joner Oliveira Alves, José O. Siqueira, Guilherme Oliveira
Biomed Res Int. 2017; 2017: 7256582. Published online 2017 Oct 3. doi: 10.1155/2017/7256582
PMCID:
PMC5651148
AbstractArticlePDF–2.4M
14.
A Reexamination of Thioredoxin Reductase from Thermoplasma acidophilum, a Thermoacidophilic Euryarchaeon, Identifies It as an NADH-Dependent Enzyme
Dwi Susanti, Usha Loganathan, Austin Compton, Biswarup Mukhopadhyay
ACS Omega. 2017 Aug 31; 2(8): 4180–4187. Published online 2017 Aug 3. doi: 10.1021/acsomega.7b00640
PMCID:
PMC5579543
AbstractArticlePDF–3.5M
15.
Diversity and Composition of Sulfate-Reducing Microbial Communities Based on Genomic DNA and RNA Transcription in Production Water of High Temperature and Corrosive Oil Reservoir
Xiao-Xiao Li, Jin-Feng Liu, Lei Zhou, Serge M. Mbadinga, Shi-Zhong Yang, Ji-Dong Gu, Bo-Zhong Mu
Front Microbiol. 2017; 8: 1011. Published online 2017 Jun 7. doi: 10.3389/fmicb.2017.01011
PMCID:
PMC5461352
AbstractArticlePDF–6.3M
16.
A RuBisCO-mediated carbon metabolic pathway in methanogenic archaea
Takunari Kono, Sandhya Mehrotra, Chikako Endo, Natsuko Kizu, Mami Matusda, Hiroyuki Kimura, Eiichi Mizohata, Tsuyoshi Inoue, Tomohisa Hasunuma, Akiho Yokota, Hiroyoshi Matsumura, Hiroki Ashida
Nat Commun. 2017; 8: 14007. Published online 2017 Jan 13. doi: 10.1038/ncomms14007
PMCID:
PMC5241800
AbstractArticlePDF–1.5M
17.
Bipartite Network Analysis of the Archaeal Virosphere: Evolutionary Connections between Viruses and Capsidless Mobile Elements
Jaime Iranzo, Eugene V. Koonin, David Prangishvili, Mart Krupovic
J Virol. 2016 Dec 15; 90(24): 11043–11055. Prepublished online 2016 Sep 28. Published online 2016 Nov 28. doi: 10.1128/JVI.01622-16
PMCID:
PMC5126363
AbstractArticlePDF–1.1M
18.
Key Factors Influencing Rates of Heterotrophic Sulfate Reduction in Active Seafloor Hydrothermal Massive Sulfide Deposits
Kiana L. Frank, Karyn L. Rogers, Daniel R. Rogers, David T. Johnston, Peter R. Girguis
Front Microbiol. 2015; 6: 1449. Published online 2015 Dec 22. doi: 10.3389/fmicb.2015.01449
PMCID:
PMC4686611
AbstractArticlePDF–2.5M
19.
Post-translational environmental switch of RadA activity by extein–intein interactions in protein splicing
Natalya I. Topilina, Olga Novikova, Matthew Stanger, Nilesh K. Banavali, Marlene Belfort
Nucleic Acids Res. 2015 Jul 27; 43(13): 6631–6648. Published online 2015 Jun 22. doi: 10.1093/nar/gkv612
PMCID:
PMC4513877
AbstractArticlePDF–2.8M
20.
Phylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis
Guanghong Zuo, Zhao Xu, Bailin Hao
Life (Basel) 2015 Mar; 5(1): 949–968. Published online 2015 Mar 17. doi: 10.3390/life5010949
PMCID:
PMC4390887
AbstractArticlePDF–1019K

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