Warning: The NCBI web site requires JavaScript to function. more...

Phytophthora pseudotsugae small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.

PopSet: 1314829966

GenBank FASTA

Go to:

Study Details

A Barcode-Based Phylogenetic Characterization of Phytophthora cactorum Identifies Two Cosmopolitan Lineages with Distinct Host Affinities and the First Report of Phytophthora pseudotsugae in California.

Bourret,T.B., Fajardo,S.N., Engert,C.P. and Rizzo,D.M.

(03-16-2022) J Fungi (Basel) 8:(3)

PMID:: 35330305

CitationFull text

Go to:

Sequences in this data set

MG685787.1Phytophthora pseudotsugae isolate TB277 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MG685786.1Phytophthora pseudotsugae isolate TB228 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MG685785.1Phytophthora pseudotsugae isolate TB224 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
MG685784.1Phytophthora pseudotsugae isolate TB206 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
MG685783.1Phytophthora pseudotsugae isolate TB204 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MG685782.1Phytophthora pseudotsugae isolate TB192 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MG685781.1Phytophthora pseudotsugae isolate TB191 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
MG685780.1Phytophthora pseudotsugae isolate TB138 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MG685779.1Phytophthora pseudotsugae isolate TB044 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
MG685778.1Phytophthora pseudotsugae isolate TB329 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence

Supplemental Content

Analyze this data set

Run BLAST alignment

Article reporting this data set

A Barcode-Based Phylogenetic Characterization of Phytophthora cactorum Identifies Two Cosmopolitan Lineages with Distinct Host Affinities and the First Report of Phytophthora pseudotsugae in California. [J Fungi (Basel). 2022]
A Barcode-Based Phylogenetic Characterization of Phytophthora cactorum Identifies Two Cosmopolitan Lineages with Distinct Host Affinities and the First Report of Phytophthora pseudotsugae in California.
Bourret TB, Fajardo SN, Engert CP, Rizzo DM. J Fungi (Basel). 2022 Mar 16; 8(3). Epub 2022 Mar 16.

Other data sets from this study

Phytophthora small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
Phytophthora small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
ecological sample study, 72 sequences
Phytophthora internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
Phytophthora internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
ecological sample study, 243 sequences

See all...

Related information

PubMed
PubMed articles cited by population set
Taxonomy
Taxonomy sequences associated with popset record
Free in PMC
Free full text articles in PMC
PopSet
sets from the same publication
Nucleotide
Nucleotide component of population set

Recent activity

Clear Turn Off Turn On

Phytophthora pseudotsugae small subunit ribosomal RNA gene, partial sequence; in...
Phytophthora pseudotsugae small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
PopSet: 1314829966

PopSet

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

PopSet

Population Sets

Send to: