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Agaricineae 28S large subunit ribosomal RNA gene, partial sequence.

PopSet: 437037634

Study Details

Iteratively refined guide trees help improving alignment and phylogenetic inference in the mushroom family bolbitiaceae.

Toth,A., Hausknecht,A., Krisai-Greilhuber,I., Papp,T., Vagvolgyi,C. and Nagy,L.G.

(2013) PLoS ONE 8:(2)E56143

PMID:: 23418526

CitationFull text

Sequences in this data set

JX968381.1Pholiotina vestita strain NL-2191 28S large subunit ribosomal RNA gene, partial sequence
JX968380.1Pholiotina vexans strain NL-3967 28S large subunit ribosomal RNA gene, partial sequence
JX968379.1Conocybe teneroides strain NL-3501 28S large subunit ribosomal RNA gene, partial sequence
JX968378.1Pholiotina indica strain WU20891 28S large subunit ribosomal RNA gene, partial sequence
JX968377.1Pholiotina arrheni strain NL-2509 28S large subunit ribosomal RNA gene, partial sequence
JX968376.1Conocybe aporos strain NL-1241 28S large subunit ribosomal RNA gene, partial sequence
JX968375.1Pholiotina brunnea strain NL-1216 28S large subunit ribosomal RNA gene, partial sequence
JX968374.1Pholiotina dentatomarginata strain NL-2921 28S large subunit ribosomal RNA gene, partial sequence
JX968373.1Pholiotina aberrans strain NL-3161 28S large subunit ribosomal RNA gene, partial sequence
JX968372.1Conocybe vinaceobrunnea strain WU17391 28S large subunit ribosomal RNA gene, partial sequence
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Alignment

Supplemental Content

Article reporting this data set

Iteratively refined guide trees help improving alignment and phylogenetic inference in the mushroom family Bolbitiaceae. [PLoS One. 2013]
Iteratively refined guide trees help improving alignment and phylogenetic inference in the mushroom family Bolbitiaceae.
Tóth A, Hausknecht A, Krisai-Greilhuber I, Papp T, Vágvölgyi C, Nagy LG. PLoS One. 2013; 8(2):e56143. Epub 2013 Feb 13.

Other data sets from this study

Agaricineae translation elongation factor 1-alpha (tef1) gene, partial cds.
Agaricineae translation elongation factor 1-alpha (tef1) gene, partial cds.
phylogenetic study, 86 sequences
Agaricineae internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
Agaricineae internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
phylogenetic study, 118 sequences

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Agaricineae 28S large subunit ribosomal RNA gene, partial sequence.
Agaricineae 28S large subunit ribosomal RNA gene, partial sequence.
PopSet: 437037634

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