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Rattus tRNA-Phe, 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, and tRNA-Leu genes, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRNA-Gln, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; cytochrome c oxidase subunit I (COX1) gene, complete cds; tRNA-Ser and tRNA-Asp genes, complete sequence; cytochrome c oxidase subunit II (COX2) gene, complete cds; tRNA-Lys gene, complete sequence; ATP synthase F0 subunit 8 (ATP8), ATP synthase F0 subunit 6 (ATP6), and NADH dehydrogenase subunit 1 (COX3) genes, complete cds; tRNA-Gly gene, complete sequence; NADH dehydrogenase subunit 3 (ND3) gene, complete cds; tRNA-Arg gene, complete sequence; NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; tRNA-His, tRNA-Ser, and tRNA-Leu genes, complete sequence; NADH dehydrogenase subunit 5 (ND5) and NADH dehydrogenase subunit 6 (ND6) genes, complete cds; tRNA-Glu gene, complete sequence; cytochrome b (CYTB) gene, complete cds; and tRNA-Thr and tRNA-Pro genes and D-loop, complete sequence; mitochondrial.

PopSet: 1846421279

GenBank FASTA

Study Details

Mitogenomes reveal multiple colonization of mountains by Rattus in Sundaland

Camacho-Sanchez,M. and Leonard,J.

(2020) J. Hered.

Sequences in this data set

  • MN126569.1Rattus exulans voucher BOR577 mitochondrion, complete genome
  • MN126568.1Rattus korinchi voucher RMNH:23151 mitochondrion, complete genome
  • MN126567.1Rattus korinchi voucher NHMUK:19.11.5.81 mitochondrion, partial genome
  • MN126566.1Rattus tanezumi voucher BOR260 mitochondrion, complete genome
  • MN126565.1Rattus sp. NH 2147 voucher SMJM:2147 mitochondrion, complete genome
  • MN126564.1Rattus tiomanicus voucher USNM:590720 mitochondrion, complete genome
  • MN126563.1Rattus tiomanicus voucher USNM:590332 mitochondrion, complete genome
  • MN126562.1Rattus tiomanicus voucher SMJM:2015 mitochondrion, complete genome
  • MN126561.1Rattus hoogerwerfi voucher ANSP:20319 mitochondrion, complete genome

Alignment

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  • txid2739836[orgn] AND "specimen-voucher ANSP 20319"[All Fields] (1)
    PopSet
  • Rattus tRNA-Phe, 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, and tRNA-Leu ge...
    Rattus tRNA-Phe, 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, and tRNA-Leu genes, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRNA-Gln, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; cytochrome c oxidase subunit I (COX1) gene, complete cds; tRNA-Ser and tRNA-Asp genes, complete sequence; cytochrome c oxidase subunit II (COX2) gene, complete cds; tRNA-Lys gene, complete sequence; ATP synthase F0 subunit 8 (ATP8), ATP synthase F0 subunit 6 (ATP6), and NADH dehydrogenase subunit 1 (COX3) genes, complete cds; tRNA-Gly gene, complete sequence; NADH dehydrogenase subunit 3 (ND3) gene, complete cds; tRNA-Arg gene, complete sequence; NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; tRNA-His, tRNA-Ser, and tRNA-Leu genes, complete sequence; NADH dehydrogenase subunit 5 (ND5) and NADH dehydrogenase subunit 6 (ND6) genes, complete cds; tRNA-Glu gene, complete sequence; cytochrome b (CYTB) gene, complete cds; and tRNA-Thr and tRNA-Pro genes and D-loop, complete sequence; mitochondrial.
    PopSet: 1846421279
    PopSet
  • BioAssay, by Gene target for Gene (Select 84817) (0)
    PubChem BioAssay
  • uncharacterized protein Dwil_GK22110 [Drosophila willistoni]
    uncharacterized protein Dwil_GK22110 [Drosophila willistoni]
    gi|194162194|gnl|WGS:AAQB|GK22110-P EDW77095.1|
    Protein
  • hypothetical protein DAPPUDRAFT_304831 [Daphnia pulex]
    hypothetical protein DAPPUDRAFT_304831 [Daphnia pulex]
    gi|321468437|gb|EFX79422.1||gnl|WGS |DAPPUDRAFT_304831
    Protein

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