Protein Family Models for Protein (Select 1575750972) - Protein Family Models - NCBI

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Items: 11

Select item 4236551.

AAA family ATPase

This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF025001.5
Method:: HMM

Select item 4233922.

GNVR domain-containing protein

This domain is found between two families, Wzz, Pfam:PF02706 and CbiA Pfam:PF01656. There is a highly conserved GNVR sequence motif which characterises this domain. The function is not known. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF025179.5
Method:: HMM

Select item 4138433.

Wzz/FepE/Etk N-terminal domain-containing protein

This HMM describes an N-terminal region of homology share by two different classes of chain length determinant proteins (also known as polysaccharide co-polymerases) and by membrane-bound tyrosine kinases such Etk, involved in the polysaccharide export.

GO Terms:

Biological Process:: lipopolysaccharide biosynthetic process (GO:0009103)

Cellular Component:: membrane (GO:0016020)

Date:: 2024-08-14

Family Accession:: NF014732.5
Method:: HMM

Select item 4022864.

new record, indexing in progress

Family Accession:

Select item 4010445.

new record, indexing in progress

Family Accession:

Select item 3905496.

new record, indexing in progress

Family Accession:

Select item 3595937.

new record, indexing in progress

Family Accession:

Select item 3595858.

new record, indexing in progress

Family Accession:

Select item 3494229.

new record, indexing in progress

Family Accession:

Select item 34804910.

new record, indexing in progress

Family Accession:

Select item 2512011.

polysaccharide biosynthesis tyrosine autokinase

Wzc family tyrosine kinases, such as CpsD of Streptococcus agalactiae, work together with cognate proteins to regulate chain length and attachment of exported polysaccharides involved in capsule formation, O-antigen biosynthesis, colanic acid biosynthesis, and similar pathways.

GO Terms:

Biological Process:: extracellular polysaccharide biosynthetic process (GO:0045226)

Date:: 2021-07-22

Family Accession:: TIGR01007.1
Method:: HMM

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Protein Family Models for Protein (Select 1575750972) (11)
Protein Family Models
Oryza meyeriana var. granulata linkage group LG9 Lachesis_group8__79_contigs__le...
Oryza meyeriana var. granulata linkage group LG9 Lachesis_group8__79_contigs__length_54699418, whole genome shotgun sequence
gi|1796505803|gb|SPHZ02000011.1||gn :SPHZ02|Lachesis_group8__79_contigs__length_54699418

Nucleotide
Thymic stromal lymphopoietin [Homo sapiens]
Thymic stromal lymphopoietin [Homo sapiens]
gi|18606304|gb|AAH22894.1|

Protein
Multiple myeloma cell lines with acquired resistance to chemotherapeutic agent c...
Multiple myeloma cell lines with acquired resistance to chemotherapeutic agent carfilzomib
Accession: GDS5826

GEO DataSets
Related DataSets for GEO Profiles (Select 131958153) (1)
GEO DataSets

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