Protein Family Models for Protein (Select 2529949261) - Protein Family Models

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Links from Protein

Items: 7

Select item 4300221.

RlmL ferredoxin-like domain

Date:: 2024-08-14

Family Accession:: NF046568.1
Method:: HMM

Select item 4209232.

class I SAM-dependent methyltransferase

Members of this family are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species. The diversity in the roles of methylation is matched by the almost bewildering number of methyltransferase enzymes that catalyse the methylation reaction. Although several classes of methyltransferase enzymes are known, the great majority of methylation reactions are catalysed by the S-adenosylmethionine-dependent methyltransferases. [1]. 12504684. SAM (dependent) I AM: the S-adenosylmethionine-dependent. methyltransferase fold.. Martin JL, McMillan FM;. Curr Opin Struct Biol. 2002;12:783-793. (from Pfam)

GO Terms:

Molecular Function:: methyltransferase activity (GO:0008168)

Date:: 2024-08-14

Family Accession:: NF022137.5
Method:: HMM

Select item 4128893.

THUMP domain-containing protein

The THUMP domain is named after after thiouridine synthases, methylases and PSUSs [1]. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously characterised RNA-binding domains [2]. It is predicted that this domain is an RNA-binding domain The THUMP domain probably functions by delivering a variety of RNA modification enzymes to their targets [1]. [1]. 11295541. THUMP - a predicted RNA-binding domain shared by 4-thiouridine,. pseudouridine synthases and RNA methylases.. Aravind L, Koonin EV;. Trends Biochem Sci 2001;26:215-217.. [2]. 16343540. Crystal structure of Bacillus anthracis ThiI, a tRNA-modifying. enzyme containing the predicted RNA-binding THUMP domain.. Waterman DG, Ortiz-Lombardia M, Fogg MJ, Koonin EV, Antson AA;. J Mol Biol. 2006;356:97-110. (from Pfam)

GO Terms: