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Links from Protein

Items: 10

1.

CGNR zinc finger domain-containing protein

This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family. (from Pfam)

Date:
2024-08-14
Family Accession:
NF023134.5
Method:
HMM
2.

ABATE domain-containing protein

The structure of one member of the ABATE domain family consists of a two-domain organisation, with the N-terminal domain presenting a new fold called the ABATE domain that may bind an as yet unknown ligand. The C-terminal domain forms a treble-clef zinc-finger that is likely to be involved in DNA binding. suggests a role as stress-induced transcriptional regulator. Further computational analyses sugeests a role as a stress-induced transcriptional regulator [1]. Members of this family are found in Streptomyces, Rhizobium, Ralstonia, Agrobacterium and Bradyrhizobium species. [1]. 20944211. The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45. A resolution reveals a new fold (the ABATE domain) and suggests. its possible role as a transcription regulator.. Bakolitsa C, Bateman A, Jin KK, McMullan D, Krishna SS, Miller. MD, Abdubek P, Acosta C, Astakhova T, Axelrod HL, Burra P,. Carlton D, Chiu HJ, Clayton T, Das D, Deller MC, Duan L, Elias. Y, Feuerhelm J, Grant JC, Grzechnik A, Grzechnik SK, Han GW,. Jaroszewski L, Klock HE, Knuth MW, Kozbial P, Kumar A, Marciano. D, Morse AT, Murphy KD, Nigoghossian E, Okach L, Oommachen S,. Paulsen J, Reyes R, Rife CL, Sefcovic N, Tien H, Trame CB, Trout. CV, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley. J, Elsliger MA, Deacon AM, Godzik A, Lesley S, Wilson IA;. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010;66:1198-1204. (from Pfam)

Date:
2024-08-14
Family Accession:
NF018984.5
Method:
HMM
3.

LacI family DNA-binding transcriptional regulator

GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Biological Process:
regulation of DNA-templated transcription (GO:0006355)
Date:
2024-08-14
Family Accession:
NF012576.5
Method:
HMM
4.
new record, indexing in progress
Family Accession:
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
Family Accession:
8.
new record, indexing in progress
Family Accession:
9.
new record, indexing in progress
Family Accession:
10.

CGNR zinc finger domain-containing protein

CGNR zinc finger domain-containing protein may bind DNA and function as a stress-induced transcriptional regulator

Date:
2024-08-21
Family Accession:
11475615
Method:
Sparcle
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