Protein Family Models for Protein (Select 2702260476) - Protein Family Models

Select item 4327891.

Protein translocase subunit SecDF, P1 domain, N-terminal

Date:: 2024-08-14

Family Accession:: NF045451.2
Method:: HMM

Select item 4304172.

SecDF, P1 head subdomain

Date:: 2024-08-14

Family Accession:: NF046871.1
Method:: HMM

Select item 4130103.

MMPL family transporter

Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport [1]. [1]. 10694977. Analysis of the proteome of Mycobacterium tuberculosis in. silico.. Tekaia F, Gordon SV, Garnier T, Brosch R, Barrell BG, Cole ST;. Tuber Lung Dis 1999;79:329-342. (from Pfam)

GO Terms:

Cellular Component:: membrane (GO:0016020)

Date:: 2024-08-14

Family Accession:: NF015155.5
Method:: HMM

Select item 4123304.

Protein export membrane protein

This family consists of various prokaryotic SecD and SecF protein export membrane proteins. This SecD and SecF proteins are part of the multimeric protein export complex comprising SecA, D, E, F, G, Y, and YajC [1]. SecD and SecF are required to maintain a proton motive force [2]. [1]. 9694879. SecDF of Bacillus subtilis, a molecular Siamese twin required. for the efficient secretion of proteins.. Bolhuis A, Broekhuizen CP, Sorokin A, van Roosmalen ML, Venema. G, Bron S, Quax WJ, van Dijl JM;. J Biol Chem 1998;273:21217-21224.. [2]. 8112309. SecD and SecF are required for the proton electrochemical. gradient stimulation of preprotein translocation.. Arkowitz RA, Wickner W;. EMBO J 1994;13:954-963. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF014416.5
Method:: HMM

Select item 4084955.

new record, indexing in progress

Family Accession:

Select item 3910916.

new record, indexing in progress

Family Accession:

Select item 3891237.

new record, indexing in progress

Family Accession:

Select item 1409078.

protein translocase subunit SecD

Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert.

Gene:: secD

GO Terms:

Biological Process:: intracellular protein transport (GO:0006886)

Molecular Function:: protein-transporting ATPase activity (GO:0015450)

Cellular Component:: cell envelope Sec protein transport complex (GO:0031522)

Biological Process:: protein transport by the Sec complex (GO:0043952)

Date:: 2024-06-04

Family Accession:: TIGR01129.1
Method:: HMM

Select item 239139.

SecD/SecF family protein translocase subunit

The SecA,SecB,SecD,SecE,SecF,SecG and SecY proteins form the protein translocation appartus in prokaryotes. This family is specific for the SecD and SecF proteins.

Date:: 2019-09-10

Family Accession:: TIGR00916.1
Method:: HMM

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