Protein Family Models for Protein (Select 446614412) - Protein Family Models

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Select item 4293371.

Elongation factor G domain 2

Date:: 2024-08-14

Family Accession:: NF046178.1
Method:: HMM

Select item 4257852.

Elongation Factor G, domain III

This domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1]. [1]. 23636399. Structures of the human and Drosophila 80S ribosome.. Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M,. Wilson DN, Beckmann R;. Nature. 2013;497:80-85. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF025845.5
Method:: HMM

Select item 4151333.

Elongation factor G, domain IV

This domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold. (from Pfam)

GO Terms:

Molecular Function:: translation elongation factor activity (GO:0003746)

Molecular Function:: GTP binding (GO:0005525)

Date:: 2024-08-14

Family Accession:: NF015706.5
Method:: HMM

Select item 4122034.

GTPase

This HMM identifies the P-loop-containing domain of large numbers of GTPases with ribosome-associated functions, including many involved in ribosome maturation (Der, Era, etc), ribosome rescue (HflX), and protein translation (InfB, Tuf, PrfC).

GO Terms:

Molecular Function:: GTP binding (GO:0005525)

Date:: 2024-08-14

Family Accession:: NF014036.5
Method:: HMM

Select item 4110745.

GTP-binding protein

This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. Cryoelectron microscopy structure.. [1]. 9311785. Visualization of elongation factor Tu on the Escherichia coli. ribosome.. Stark H, Rodnina MV, Rinke-Appel J, Brimacombe R, Wintermeyer W,. van Heel M;. Nature 1997;389:403-406. (from Pfam)

GO Terms:

Molecular Function:: GTPase activity (GO:0003924)

Molecular Function:: GTP binding (GO:0005525)

Date:: 2024-08-14

Family Accession:: NF012239.5
Method:: HMM

Select item 4108476.

Elongation factor G C-terminus

This domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF012882.5
Method:: HMM

Select item 4010857.

new record, indexing in progress

Family Accession:

Select item 3916858.

new record, indexing in progress

Family Accession:

Select item 3896929.

new record, indexing in progress

Family Accession:

Select item 38860210.

new record, indexing in progress

Family Accession:

Select item 38821711.

new record, indexing in progress

Family Accession:

Select item 35894112.

new record, indexing in progress

Family Accession:

Select item 35009013.

new record, indexing in progress

Family Accession:

Select item 34824314.

new record, indexing in progress

Family Accession:

Select item 34816015.

new record, indexing in progress

Family Accession:

Select item 34763116.

new record, indexing in progress

Family Accession:

Select item 9805217.

GTP-binding protein

GTP-binding protein such as tetracycline resistance protein TetO/TetM, which abolishes the inhibitory effect of tetracyclin on protein synthesis by a non-covalent modification of the ribosomes

Date:: 2020-07-15

Family Accession:: 11422292
Method:: Sparcle

Select item 8561018.

tetracycline resistance ribosomal protection protein Tet(O)

Gene:: tet(O)

Date:: 2019-03-27

Family Accession:: NBR008283
Method:: BlastRule

Select item 3684019.

new record, indexing in progress

Family Accession:

Select item 3624720.

new record, indexing in progress

Family Accession:

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