Protein Family Models

This family locates between the N-terminal domain and MMR_HSR1 50S ribosome-binding GTPase of GTP-binding HflX-like proteins. The full-length members bind and interact with the 50S ribosome and are GTPases, hydrolysing GTP/GDP/ATP/ADP. This region is unknown for its function. (from Pfam)

Date:

2024-08-14

This is the N-terminal region of GTP-binding HflX-like proteins. The full-length members bind and interact with the 50S ribosome and are GTPases, hydrolysing GTP/GDP/ATP/ADP. This N-terminal region is necessary for stability of the whole protein. [1]. 19109926. E. coli HflX interacts with 50S ribosomal subunits in presence. of nucleotides.. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D,. Parrack P, Prakash B;. Biochem Biophys Res Commun. 2009;379:201-205.. [2]. 19181811. Properties of HflX, an enigmatic protein from Escherichia coli.. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;. J Bacteriol. 2009;191:2307-2314.. [3]. 19824612. Toward understanding the function of the universally conserved. GTPase HflX from Escherichia coli: a kinetic approach.. Shields MJ, Fischer JJ, Wieden HJ;. Biochemistry. 2009;48:10793-10802. (from Pfam)

Date:

2024-08-14

This HMM identifies the P-loop-containing domain of large numbers of GTPases with ribosome-associated functions, including many involved in ribosome maturation (Der, Era, etc), ribosome rescue (HflX), and protein translation (InfB, Tuf, PrfC).

Date:

2024-08-14

Pfam combines a number of different Prosite families together 3D Structure reference.. [1]. 7990966. Structure of the human ADP-ribosylation factor 1 complexed with. GDP.. Amor JC, Harrison DH, Kahn RA, Ringe D;. Nature 1994;372:704-708.. Mini review.. [2]. 7759471. Structure and function of ARF proteins: Activators of cholera. toxin and critical components of intracellular vesicular. transport processes.. Moss J, Vaughan M;. J. Biol. Chem. 1995;270:12327-12330.. [3]. 7770914. Arf proteins: the membrane traffic police?. Boman AL, Kahn RA;. Trends Biochem Sci 1995;20:147-150.. [4]. 1899243. Human ADP-ribosylation factors. A functionally conserved family. of GTP-binding proteins.. Kahn RA, Kern FG, Clark J, Gelmann EP, Rulka C;. J Biol Chem 1991;266:2606-2614. (from Pfam)

Date:

2024-08-14

HflX GTPase family protein similar to GTPase HflX, which is a GTP-binding protein with a GTP hydrolysis activity that is stimulated by binding to the 50S ribosome subunit, and it may play a role during protein synthesis or ribosome biogenesis

Date:

2024-04-29

This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like).

Gene:

hflX

Date:

2024-07-08