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Links from Protein

Items: 11

1.

DUF933 domain-containing protein

This domain is found at the C terminus of the YchF GTP-binding protein (Swiss:O13998) and is possibly related to the ubiquitin-like and MoaD/ThiS superfamilies. (from Pfam)

Date:
2024-08-14
Family Accession:
NF017847.5
Method:
HMM
2.

FeoB small GTPase domain-containing protein

Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions [1]. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent [1]. [1]. 8407793. Characterization of the ferrous iron uptake system of. Escherichia coli.. Kammler M, Schon C, Hantke K;. J Bacteriol 1993;175:6212-6219. (from Pfam)

GO Terms:
Molecular Function:
GTP binding (GO:0005525)
Date:
2024-08-14
Family Accession:
NF014474.5
Method:
HMM
3.

GTPase

This HMM identifies the P-loop-containing domain of large numbers of GTPases with ribosome-associated functions, including many involved in ribosome maturation (Der, Era, etc), ribosome rescue (HflX), and protein translation (InfB, Tuf, PrfC).

GO Terms:
Molecular Function:
GTP binding (GO:0005525)
Date:
2024-08-14
Family Accession:
NF014036.5
Method:
HMM
4.
new record, indexing in progress
Family Accession:
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
Family Accession:
8.
new record, indexing in progress
Family Accession:
9.
new record, indexing in progress
Family Accession:
10.

redox-regulated ATPase YchF

redox-regulated ATPase YchF belongs to the Obg (GTPase) family, but actually prefers ATP, associates with ribosomes, and appears to be regulated by the redox state of the cell

Date:
2024-08-03
Family Accession:
17564584
Method:
Sparcle
11.

redox-regulated ATPase YchF

YchF belongs to a larger family in which GTPase activity is expected, but actually prefers ATP. It is universal in bacterial genomes, associates with ribosomes, and appears to be regulated by the redox state of the cell.

Gene:
ychF
GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Molecular Function:
GTP binding (GO:0005525)
Molecular Function:
ATP hydrolysis activity (GO:0016887)
Date:
2024-05-30
Family Accession:
TIGR00092.1
Method:
HMM
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