Usher syndrome type 2 caused by activation of an USH2A pseudoexon: implications for diagnosis and therapy

Hum Mutat. 2012 Jan;33(1):104-8. doi: 10.1002/humu.21634. Epub 2011 Nov 16.

Abstract

USH2A sequencing in three affected members of a large family, referred for the recessive USH2 syndrome, identified a single pathogenic alteration in one of them and a different mutation in the two affected nieces. As the patients carried a common USH2A haplotype, they likely shared a mutation not found by standard sequencing techniques. Analysis of RNA from nasal cells in one affected individual identified an additional pseudoexon (PE) resulting from a deep intronic mutation. This was confirmed by minigene assay. This is the first example in Usher syndrome (USH) with a mutation causing activation of a PE. The finding of this alteration in eight other individuals of mixed European origin emphasizes the importance of including RNA analysis in a comprehensive diagnostic service. Finally, this mutation, which would not have been found by whole-exome sequencing, could offer, for the first time in USH, the possibility of therapeutic correction by antisense oligonucleotides (AONs).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Case-Control Studies
  • DNA Mutational Analysis
  • Europe
  • Exome
  • Exons / genetics*
  • Extracellular Matrix Proteins / genetics*
  • Female
  • Genes, Recessive
  • Genotype
  • Haplotypes
  • Hearing Loss, Sensorineural / diagnosis
  • Hearing Loss, Sensorineural / drug therapy
  • Hearing Loss, Sensorineural / genetics*
  • Humans
  • Male
  • Molecular Sequence Data
  • Mutation
  • Oligonucleotides, Antisense / administration & dosage
  • Oligonucleotides, Antisense / therapeutic use
  • Pedigree
  • Retinitis Pigmentosa / diagnosis
  • Retinitis Pigmentosa / drug therapy
  • Retinitis Pigmentosa / genetics*
  • Sequence Analysis, RNA*
  • Severity of Illness Index
  • Usher Syndromes / diagnosis
  • Usher Syndromes / drug therapy
  • Usher Syndromes / genetics*

Substances

  • Extracellular Matrix Proteins
  • Oligonucleotides, Antisense
  • USH2A protein, human

Supplementary concepts

  • Usher syndrome, type 2A