H3K4me3 interactions with TAF3 regulate preinitiation complex assembly and selective gene activation

Cell. 2013 Feb 28;152(5):1021-36. doi: 10.1016/j.cell.2013.01.052.

Abstract

Histone modifications regulate chromatin-dependent processes, yet the mechanisms by which they contribute to specific outcomes remain unclear. H3K4me3 is a prominent histone mark that is associated with active genes and promotes transcription through interactions with effector proteins that include initiation factor TFIID. We demonstrate that H3K4me3-TAF3 interactions direct global TFIID recruitment to active genes, some of which are p53 targets. Further analyses show that (1) H3K4me3 enhances p53-dependent transcription by stimulating preinitiation complex (PIC) formation; (2) H3K4me3, through TAF3 interactions, can act either independently or cooperatively with the TATA box to direct PIC formation and transcription; and (3) H3K4me3-TAF3/TFIID interactions regulate gene-selective functions of p53 in response to genotoxic stress. Our findings indicate a mechanism by which H3K4me3 directs PIC assembly for the rapid induction of specific p53 target genes.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line, Tumor
  • Histone Code*
  • Histones / metabolism*
  • Humans
  • Lysine / metabolism
  • Methylation
  • TATA Box
  • TATA-Binding Protein Associated Factors
  • Transcription Factor TFIID / metabolism*
  • Transcription Initiation, Genetic*
  • Transcriptional Activation
  • Tumor Suppressor Protein p53 / metabolism
  • p300-CBP Transcription Factors / metabolism

Substances

  • Histones
  • TAF3 protein, human
  • TATA-Binding Protein Associated Factors
  • TP53 protein, human
  • Transcription Factor TFIID
  • Tumor Suppressor Protein p53
  • p300-CBP Transcription Factors
  • Lysine

Associated data

  • GEO/GSE43542