Xp22.3 interstitial deletion: a recognizable chromosomal abnormality encompassing VCX3A and STS genes in a patient with X-linked ichthyosis and mental retardation

Gene. 2013 Sep 25;527(2):578-83. doi: 10.1016/j.gene.2013.06.018. Epub 2013 Jun 18.

Abstract

X-linked ichthyosis is a genetic disorder affecting the skin and caused by a deficit in the steroid sulfatase enzyme (STS), often associated with a recurrent microdeletion at Xp22.31. Most of the STS deleted patients have X-linked ichthyosis as the only clinical feature and it is believed that patients with more complex disorders including mental retardation could be present as a result of contiguous gene deletion. In fact, VCX3A gene, a member of the VCX (variable charge, X chromosome) gene family, was previously proposed as the candidate gene for X-linked non-specific mental retardation in patients with X-linked ichthyosis. We report on a boy with familial ichthyosis, dysmorphic features and moderate mental retardation with approximately 2 Mb interstitial deletion on Xp22.3 involving VCX3A and STS genes.

Keywords: 4,6 diamino-2-phenylindole; ADHD; CGH array; CNV; DAPI; FISH; FMR1; Genomic rearrangements; HDHD1A; KAL1; Kallmann syndrome 1; MR; Mb; NAHR; ND; NLGN4X; PNPLA4; SHOX; STS; STS deficiency; VCX; VCX2; VCX3A; VCX3B; Whole genome analysis; X-linked ichthyosis; X-linked mental retardation; XLI; XLMR; attention deficit-hyperactivity disorder; comparative genomic hybridization; copy number variation; fluorescence in situ hybridization; fragile X mental retardation 1; haloacid dehalogenase-like hydrolase domain-containing 1; megabase; mental retardation; neuroligin 4, X-linked; nonallelic homologous recombination; not determined; patatin-like phospholipase domain containing 4; short stature homeobox; steroid sulfatase enzyme; variable charge, X-linked; variable charge, X-linked 2; variable charge, X-linked 3A; variable charge, X-linked 3B.

Publication types

  • Case Reports

MeSH terms

  • Adolescent
  • Chromosome Deletion*
  • Chromosomes, Human, X*
  • Comparative Genomic Hybridization
  • Female
  • Humans
  • Ichthyosis, X-Linked / genetics*
  • In Situ Hybridization, Fluorescence
  • Male
  • Mental Retardation, X-Linked / genetics*
  • Nuclear Proteins / genetics*
  • Pedigree
  • Steryl-Sulfatase / genetics*

Substances

  • Nuclear Proteins
  • VCX3A protein, human
  • STS protein, human
  • Steryl-Sulfatase