Mass spectrometric analysis of host cell proteins interacting with dengue virus nonstructural protein 1 in dengue virus-infected HepG2 cells

Biochim Biophys Acta. 2016 Sep;1864(9):1270-1280. doi: 10.1016/j.bbapap.2016.04.008. Epub 2016 Apr 21.

Abstract

Dengue virus (DENV) infection is a leading cause of the mosquito-borne infectious diseases that affect humans worldwide. Virus-host interactions appear to play significant roles in DENV replication and the pathogenesis of DENV infection. Nonstructural protein 1 (NS1) of DENV is likely involved in these processes; however, its associations with host cell proteins in DENV infection remain unclear. In this study, we used a combination of techniques (immunoprecipitation, in-solution trypsin digestion, and LC-MS/MS) to identify the host cell proteins that interact with cell-associated NS1 in an in vitro model of DENV infection in the human hepatocyte HepG2 cell line. Thirty-six novel host cell proteins were identified as potential DENV NS1-interacting partners. A large number of these proteins had characteristic binding or catalytic activities, and were involved in cellular metabolism. Coimmunoprecipitation and colocalization assays confirmed the interactions of DENV NS1 and human NIMA-related kinase 2 (NEK2), thousand and one amino acid protein kinase 1 (TAO1), and component of oligomeric Golgi complex 1 (COG1) proteins in virus-infected cells. This study reports a novel set of DENV NS1-interacting host cell proteins in the HepG2 cell line and proposes possible roles for human NEK2, TAO1, and COG1 in DENV infection.

Keywords: Dengue virus; Nonstructural protein 1; Virus replication; Virus–host interaction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Vesicular Transport / genetics
  • Adaptor Proteins, Vesicular Transport / metabolism*
  • Dengue Virus / genetics
  • Dengue Virus / metabolism*
  • Gene Expression Regulation
  • Hep G2 Cells
  • Host-Pathogen Interactions*
  • Humans
  • NIMA-Related Kinases / genetics
  • NIMA-Related Kinases / metabolism*
  • Protein Binding
  • Protein Interaction Mapping
  • Protein Serine-Threonine Kinases / genetics
  • Protein Serine-Threonine Kinases / metabolism*
  • Signal Transduction
  • Tandem Mass Spectrometry
  • Viral Nonstructural Proteins / genetics
  • Viral Nonstructural Proteins / metabolism*
  • Virus Replication

Substances

  • Adaptor Proteins, Vesicular Transport
  • COG1 protein, human
  • NS1 protein, dengue-1 virus
  • Viral Nonstructural Proteins
  • NEK2 protein, human
  • NIMA-Related Kinases
  • Protein Serine-Threonine Kinases
  • TAO1 protein kinase