De Novo Variants in the ATPase Module of MORC2 Cause a Neurodevelopmental Disorder with Growth Retardation and Variable Craniofacial Dysmorphism

Maria J Guillen Sacoto; Iva A Tchasovnikarova; Erin Torti; Cara Forster; E Hallie Andrew; Irina Anselm; Kristin W Baranano; Lauren C Briere; Julie S Cohen; William J Craigen; Cheryl Cytrynbaum; Nina Ekhilevitch; Matthew J Elrick; Ali Fatemi; Jamie L Fraser; Renata C Gallagher; Andrea Guerin; Devon Haynes; Frances A High; Cara N Inglese; Courtney Kiss; Mary Kay Koenig; Joel Krier; Kristin Lindstrom; Michael Marble; Hannah Meddaugh; Ellen S Moran; Chantal F Morel; Weiyi Mu; Eric A Muller 2nd; Jessica Nance; Marvin R Natowicz; Adam L Numis; Bridget Ostrem; John Pappas; Carl E Stafstrom; Haley Streff; David A Sweetser; Marta Szybowska; Undiagnosed Diseases Network; Melissa A Walker; Wei Wang; Karin Weiss; Rosanna Weksberg; Patricia G Wheeler; Grace Yoon; Robert E Kingston; Jane Juusola

doi:10.1016/j.ajhg.2020.06.013

De Novo Variants in the ATPase Module of MORC2 Cause a Neurodevelopmental Disorder with Growth Retardation and Variable Craniofacial Dysmorphism

Am J Hum Genet. 2020 Aug 6;107(2):352-363. doi: 10.1016/j.ajhg.2020.06.013. Epub 2020 Jul 20.

Authors

Maria J Guillen Sacoto¹, Iva A Tchasovnikarova², Erin Torti³, Cara Forster³, E Hallie Andrew⁴, Irina Anselm⁵, Kristin W Baranano⁶, Lauren C Briere⁷, Julie S Cohen⁸, William J Craigen⁹, Cheryl Cytrynbaum¹⁰, Nina Ekhilevitch¹¹, Matthew J Elrick⁶, Ali Fatemi¹², Jamie L Fraser⁴, Renata C Gallagher¹³, Andrea Guerin¹⁴, Devon Haynes¹⁵, Frances A High⁷, Cara N Inglese¹⁶, Courtney Kiss¹⁴, Mary Kay Koenig¹⁷, Joel Krier¹⁸, Kristin Lindstrom¹⁹, Michael Marble²⁰, Hannah Meddaugh²¹, Ellen S Moran²², Chantal F Morel²³, Weiyi Mu²⁴, Eric A Muller 2nd²⁵, Jessica Nance²⁶, Marvin R Natowicz²⁷, Adam L Numis²⁸, Bridget Ostrem²⁹, John Pappas³⁰, Carl E Stafstrom⁶, Haley Streff⁹, David A Sweetser⁷, Marta Szybowska³¹; Undiagnosed Diseases Network; Melissa A Walker³², Wei Wang³, Karin Weiss¹¹, Rosanna Weksberg³³, Patricia G Wheeler¹⁵, Grace Yoon¹⁶, Robert E Kingston², Jane Juusola³

Affiliations

¹ GeneDx, Inc., Gaithersburg, MD 20877, USA. Electronic address: mguillen@genedx.com.
² Department of Molecular Biology, Massachusetts General Hospital, Boston, MA 02114, USA; Department of Genetics, Harvard Medical School, Boston, MA 02114, USA.
³ GeneDx, Inc., Gaithersburg, MD 20877, USA.
⁴ Myelin Disorders Program, Rare Disease Institute, Children's National Hospital, Washington, DC 20010, USA.
⁵ Department of Neurology, Boston Children's Hospital, Boston, MA 02115, USA.
⁶ Department of Neurology, Johns Hopkins School of Medicine, Baltimore, MD 21287, USA.
⁷ Department of Medical Genetics and Metabolism, Massachusetts General Hospital, Boston, MA 02114, USA.
⁸ Department of Neurology, Johns Hopkins School of Medicine, Baltimore, MD 21287, USA; Department of Neurology and Developmental Medicine, Division of Neurogenetics, Kennedy Krieger Institute, Baltimore, MD 21205, USA; Center for Genetic Muscle Disorders, Kennedy Krieger Institute, Baltimore, MD 21205, USA.
⁹ Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
¹⁰ Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada; Division of Clinical and Metabolic Genetics, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada.
¹¹ The Genetics Institute, Rambam Health Care Campus, Haifa 3109601, Israel.
¹² Department of Neurology, Johns Hopkins School of Medicine, Baltimore, MD 21287, USA; Department of Neurology and Developmental Medicine, Division of Neurogenetics, Kennedy Krieger Institute, Baltimore, MD 21205, USA; Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
¹³ Department of Pediatrics, Division of Medical Genetics, University of California, San Francisco, CA 94158, USA.
¹⁴ Division of Medical Genetics, Department of Pediatrics, Queen's University, Kingston, ON K7L 2V7, Canada.
¹⁵ Division of Genetics, Arnold Palmer Hospital for Children, Orlando Health, Orlando, FL 32806, USA.
¹⁶ Division of Clinical and Metabolic Genetics, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada.
¹⁷ Department of Pediatrics, University of Texas McGovern Medical School, Houston, TX 77030, USA.
¹⁸ Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, MA 02115, USA.
¹⁹ Division of Genetics and Metabolism, Phoenix Children's Hospital, Phoenix, AZ 85016, USA.
²⁰ Department of Pediatrics, Division of Clinical Genetics and Metabolism, LSU Health Sciences Center and Children's Hospital, New Orleans, LA 70112, USA.
²¹ Department of Clinical Genetics and Metabolism, Children's Hospital New Orleans, New Orleans, LA 70118, USA.
²² Hassenfeld Children's Hospital at New York University Langone, New York University Langone Orthopedic Hospital, New York, NY 10003, USA.
²³ Fred A. Litwin Family Center in Genetic Medicine, University Health Network, Toronto, ON M5T 3L9, Canada; Department of Medicine, University of Toronto, Toronto, ON M5S 1A8, Canada.
²⁴ McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
²⁵ Clinical Genetics, Stanford Children's Health, San Francisco, CA 94109, USA.
²⁶ Department of Neurology, Johns Hopkins School of Medicine, Baltimore, MD 21287, USA; Center for Genetic Muscle Disorders, Kennedy Krieger Institute, Baltimore, MD 21205, USA.
²⁷ Institutes of Pathology and Laboratory Medicine and Genomic Medicine, Cleveland Clinic, Cleveland, OH 44195, USA.
²⁸ Department of Neurology and Pediatrics, University of California, San Francisco, San Francisco, CA 94158, USA.
²⁹ Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.
³⁰ Clinical Genetic Services, Pediatrics, NYU Grossman School of Medicine, New York, NY 10016, USA.
³¹ Fred A. Litwin Family Center in Genetic Medicine, University Health Network, Toronto, ON M5T 3L9, Canada.
³² Department of Neurology, Division of Neurogenetics, Massachusetts General Hospital, Boston, MA 02114, USA.
³³ Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada; Division of Clinical and Metabolic Genetics, The Hospital for Sick Children, Toronto, ON M5G 1X8, Canada; Department of Pediatrics and Institute of Medical Science, University of Toronto, Toronto, ON M5G 1X8, Canada.

Abstract

MORC2 encodes an ATPase that plays a role in chromatin remodeling, DNA repair, and transcriptional regulation. Heterozygous variants in MORC2 have been reported in individuals with autosomal-dominant Charcot-Marie-Tooth disease type 2Z and spinal muscular atrophy, and the onset of symptoms ranges from infancy to the second decade of life. Here, we present a cohort of 20 individuals referred for exome sequencing who harbor pathogenic variants in the ATPase module of MORC2. Individuals presented with a similar phenotype consisting of developmental delay, intellectual disability, growth retardation, microcephaly, and variable craniofacial dysmorphism. Weakness, hyporeflexia, and electrophysiologic abnormalities suggestive of neuropathy were frequently observed but were not the predominant feature. Five of 18 individuals for whom brain imaging was available had lesions reminiscent of those observed in Leigh syndrome, and five of six individuals who had dilated eye exams had retinal pigmentary abnormalities. Functional assays revealed that these MORC2 variants result in hyperactivation of epigenetic silencing by the HUSH complex, supporting their pathogenicity. The described set of morphological, growth, developmental, and neurological findings and medical concerns expands the spectrum of genetic disorders resulting from pathogenic variants in MORC2.

Keywords: CMT2Z; Leigh-like disease; MORC2; developmental delay; intellectual disability; microcephaly.

Publication types

Research Support, N.I.H., Extramural

MeSH terms

Adenosine Triphosphatases / genetics*
Adolescent
Adult
Child
Child, Preschool
Craniofacial Abnormalities / genetics*
Female
Genetic Diseases, Inborn / genetics
Growth Disorders / genetics*
Heterozygote
Humans
Infant
Intellectual Disability / genetics
Male
Microcephaly / genetics
Middle Aged
Mutation / genetics*
Neurodevelopmental Disorders / genetics*
Phenotype
Transcription Factors / genetics*
Young Adult

Substances

MORC2 protein, human
Transcription Factors
Adenosine Triphosphatases

Abstract

Publication types

MeSH terms

Substances

Grants and funding