Association Analysis Between Common Variants of the TRPM1 Gene and Three Mental Disorders in the Han Chinese Population

Genet Test Mol Biomarkers. 2020 Oct;24(10):649-657. doi: 10.1089/gtmb.2019.0096. Epub 2020 Oct 1.

Abstract

Objective: Our study was designed to determine if the TRPM1 gene is associated with any of three mental disorders. The project included a cross disorder meta-analysis and association analysis including 141701 cases and 175248 controls. Materials and Methods: We genotyped eight tag single nucleotide polymorphisms (SNPs) in 1248 unrelated schizophrenia (SCZ) patients, 1056 major depressive disorder patients, 1344 bipolar disorder patients, and 1248 normal controls. We then performed a meta-analysis of 10 GWASs to identify common genetic factors among these three mental disorders. Finally, we performed a meta-analysis of six GWASs to explore the role of rs10162727 in SCZ. Result: Although two haplotypes of the TRPM1 gene, rs1035706-rs10162727 and rs10162727-rs3784599, were identified in the control group, as well as all three disease groups, none of the eight tag SNP associations remained significant after correction for multiple tests. In this cross-disorder meta-analysis of the three diseases, none of the tag SNPs were confirmed to be common among the diseases. In addition, in the meta-analysis conducted for the rs10162727 locus in SCZ, there was no significant association (p-value = 0.84, odds ratio = 1.02 [95% CI = 0.87-1.19]). Conclusion: In the Han Chinese population, no significant evidence was found linking variants of the TRPM1 gene with any of the mental disorders examined.

Keywords: TRPM1; association study; bipolar disorder; major depressive disorder; schizophrenia.

Publication types

  • Meta-Analysis

MeSH terms

  • Adult
  • Asian People / genetics
  • Bipolar Disorder / genetics
  • Case-Control Studies
  • China
  • Databases, Genetic
  • Depressive Disorder, Major / genetics
  • Ethnicity / genetics
  • Female
  • Genetic Predisposition to Disease / genetics
  • Genome-Wide Association Study / methods
  • Genotype
  • Haplotypes
  • Humans
  • Linkage Disequilibrium / genetics
  • Male
  • Mental Disorders / genetics*
  • Mental Disorders / metabolism
  • Middle Aged
  • Polymorphism, Single Nucleotide / genetics
  • Schizophrenia / genetics
  • TRPM Cation Channels / genetics*
  • TRPM Cation Channels / metabolism

Substances

  • TRPM Cation Channels
  • TRPM1 protein, human