The functional role of the eukaryote-specific motif YxxPKxYxK of the human ribosomal protein eS26 in translation

Biochim Biophys Acta Gene Regul Mech. 2022 Aug;1865(6):194842. doi: 10.1016/j.bbagrm.2022.194842. Epub 2022 Jul 8.

Abstract

The protein eS26 is a structural component of the eukaryotic small ribosomal subunit involved in the formation of the mRNA binding channel in the region of the exit site. By applying site-directed cross-linking to mammalian 80S ribosomes, it has been shown that the same mRNA nucleotide residues are implicated in the interaction with both eS26 and translation initiation factor 3 (eIF3) and that contacts of the protein with mRNAs are mediated by its eukaryote-specific motif YxxPKxYxK. To examine the role of eS26 in translation, we transfected HEK293T cells with plasmid constructs encoding the wild-type FLAG-labeled protein (wt-eS26FLAG) or its forms with either a single substitution of any conserved amino acid residue in the above motif, or a simultaneous replacement of all the five ones (5A). The western blot analysis of fractions of polysome profiles from the transfected cells revealed no effects of the single mutations in eS26, but showed that the replacement of the five conserved residues led to the increased share of the light polysome fraction compared to that detected with control, wt-eS26FLAG-producing cells. In addition, the above fraction exhibited the enhanced content of the eIF3e subunit that is known to promote selective translation. These findings, together with real-time PCR data on the relative contents of specific mRNAs in light and heavy polysomes from cells producing the mutant 5A compared to those from control cells, suggest a possible involvement of the YxxPKxYxK motif of eS26 in the fine regulation of translation to maintain the required balance of synthesized proteins.

Keywords: Amino acid substitutions in human ribosomal protein eS26; Initiation factor eIF3; Polysome profiling; Role of eS26 in the regulation of translation of specific mRNAs; Transient transfection of HEK293T cells.

MeSH terms

  • Animals
  • Eukaryota / genetics
  • Eukaryotic Initiation Factor-3 / genetics
  • HEK293 Cells
  • Humans
  • Mammals / genetics
  • Protein Biosynthesis*
  • RNA, Messenger / metabolism
  • Ribosomal Proteins / chemistry
  • Ribosomal Proteins / metabolism*
  • Ribosomes / genetics

Substances

  • Eukaryotic Initiation Factor-3
  • RNA, Messenger
  • RPS26 protein, human
  • Ribosomal Proteins