Biological Functions of the KDM2 Family of Histone Demethylases

Adv Exp Med Biol. 2023:1433:51-68. doi: 10.1007/978-3-031-38176-8_3.

Abstract

The histone lysine demethylase 2 (KDM2) family of α-Ketoglutarate-Fe++-dependent dioxygenases were the first Jumonji-domain-containing proteins reported to harbor demethylase activity. This landmark discovery paved the way for the characterization of more than 25 enzymes capable of demethylating lysine residues on histones-an epigenetic modification previously thought to be irreversible. The KDM2 family is comprised of KDM2A and KDM2B which share significant structural similarities and demethylate lysine 36 on histone H3. However, they exert distinct cellular functions and are frequently deregulated in a broad spectrum of human cancers. With the advent of next generation sequencing and development of genetically engineered mouse models, it was shown that KDM2A and KDM2B play critical roles in stem cell biology, somatic cell reprograming, and organismal development by regulating cell fate and lineage commitment decisions. Thus, understanding the biochemistry and elucidating the context-dependent function of these enzymes is an emerging new frontier for the development of small molecule inhibitors to treat cancer and other diseases.

Keywords: Cancer; DNA methylation; Histone demethylase; Histone modification; Jumonji; KDM2A; KDM2B; Leukemia; Pancreatic cancer.

MeSH terms

  • Animals
  • Cell Differentiation
  • Epigenesis, Genetic
  • F-Box Proteins*
  • High-Throughput Nucleotide Sequencing
  • Histone Demethylases*
  • Histones
  • Humans
  • Jumonji Domain-Containing Histone Demethylases / genetics
  • Lysine
  • Mice

Substances

  • Histone Demethylases
  • Lysine
  • Histones
  • KDM2A protein, human
  • F-Box Proteins
  • Jumonji Domain-Containing Histone Demethylases