Non-homologous recombination within the major histocompatibility complex creates a transcribed hybrid sequence

Mamm Genome. 1994 Dec;5(12):771-6. doi: 10.1007/BF00292011.

Abstract

The P5-1 cDNA clone maps to the human MHC class I region (Vernet et al. 1993a). In this paper, we show that the P5-1 cDNA represents a chimeric transcript in which the first exon of an MHC class I gene has been spliced to an unrelated sequence. The corresponding gene P5-1 is composed of the 5' sequence of an MHC class I gene including the promoter region, the first exon, and the half of the first intron fused to an unrelated intron, followed by a large exon. Furthermore, the non-class I part of P5-1 is present within the MHC class I region in multiple copies, defining the P5 family. Another member of the P5 family is fused to a class I gene, although by a type of rearrangement different from P5-1. These two fusion events between members of HLA class I and P5 families reflect the existence of a duplication unit including two class I genes and a P5 sequence. These data shed light on the MHC class I evolution and on the creation and evolution of new genes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Cloning, Molecular
  • DNA, Complementary
  • Exons
  • Gene Expression
  • Genes, MHC Class I / genetics*
  • Humans
  • Introns
  • Major Histocompatibility Complex
  • Molecular Sequence Data
  • Multigene Family
  • Promoter Regions, Genetic
  • Proteins / genetics*
  • RNA, Long Noncoding
  • RNA, Untranslated
  • Recombinant Fusion Proteins / genetics*
  • Recombination, Genetic*

Substances

  • DNA, Complementary
  • HCP5 long noncoding RNA, human
  • Proteins
  • RNA, Long Noncoding
  • RNA, Untranslated
  • Recombinant Fusion Proteins

Associated data

  • GENBANK/Z31702