An Ac transposon system based on maize chromosome 4S for isolating long-distance-transposed Ac tags in the maize genome

Genetica. 2010 Dec;138(11-12):1261-70. doi: 10.1007/s10709-010-9526-0. Epub 2010 Nov 20.

Abstract

Transposon tagging is an important tool for gene isolation and functional studies. In maize, several transposon-tagging systems have been developed, mostly using Activator/Dissociation (Ac/Ds) and Mutator systems. Here, we establish another Ac-based transposon system with the donor Ac tightly linked with sugary1 (su1) on maize chromosome 4S. Newly transposed Ac (tr-Acs) were detected based on a negative dosage effect, and long-distance-transposed Ac events were identified and isolated from the donor Ac by a simple backcross scheme. In this study, we identified 208 independent long-distance-transposed Ac lines. Thirty-one flanking sequences of these tr-Acs were isolated and localized in the maize genome. As found in previous studies, the tr-Acs preferentially inserted into genic sequences. The distribution of tr-Acs is not random. In our study, the tr-Acs preferentially transposed into chromosomes 1, 2, 9 and 10. We discuss the preferential distribution of tr-Acs from Ac systems. Our system is complementary to two other Ac-based regional-mutagenesis systems in maize, and the combined use of these systems will achieve an even and high-density distribution of Ac elements throughout the maize genome for functional-genomics studies.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Chromosome Mapping
  • Chromosomes, Plant / genetics*
  • Cloning, Molecular
  • DNA Transposable Elements*
  • DNA, Plant / genetics*
  • Genome, Plant*
  • Molecular Sequence Data
  • Mutagenesis, Insertional
  • Sequence Analysis, DNA
  • Zea mays / genetics*

Substances

  • DNA Transposable Elements
  • DNA, Plant

Associated data

  • GENBANK/HM017863
  • GENBANK/HM017893