Isolation, selection and characterization of root-associated growth promoting bacteria in Brazil Pine (Araucaria angustifolia)

Microbiol Res. 2012 Jan 20;167(2):69-78. doi: 10.1016/j.micres.2011.03.003. Epub 2011 May 18.

Abstract

Araucaria angustifolia, a unique species of this genus that occurs naturally in Brazil, has a high socio-economic and environmental value and is critically endangered of extinction, since it has been submitted to intense predatory exploitation during the last century. Root-associated bacteria from A. angustifolia were isolated, selected and characterized for their biotechnological potential of growth promotion and biocontrol of plant pathogenic fungi. Ninety-seven strains were isolated and subjected to chemical tests. All isolates presented at least one positive feature, characterizing them as potential PGPR. Eighteen isolates produced indole-3-acetic acid (IAA), 27 were able to solubilize inorganic phosphate, 21 isolates were presumable diazotrophs, with pellicle formation in nitrogen-free culture medium, 83 were phosphatases producers, 37 were positive for siderophores and 45 endospore-forming isolates were antagonistic to Fusarium oxysporum, a pathogen of conifers. We also observed the presence of bacterial strains with multiple beneficial mechanisms of action. Analyzing the fatty acid methyl ester (FAME) and partial sequencing of the 16S rRNA gene of these isolates, it was possible to characterize the most effective isolates as belonging to Bacillaceae (9 isolates), Enterobacteriaceae (11) and Pseudomonadaceae (1). As far as we know, this is the first study to include the species Ewingella americana as a PGPR.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antibiosis
  • Bacteria / classification*
  • Bacteria / isolation & purification*
  • Bacteria / metabolism
  • Brazil
  • Cluster Analysis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fusarium / growth & development
  • Molecular Sequence Data
  • Phylogeny
  • Plant Growth Regulators / metabolism
  • Plant Roots / microbiology*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Tracheophyta / growth & development*
  • Tracheophyta / microbiology*

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Plant Growth Regulators
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/HQ699440
  • GENBANK/HQ699441
  • GENBANK/HQ699442
  • GENBANK/HQ699443
  • GENBANK/HQ699444
  • GENBANK/HQ699445
  • GENBANK/HQ699446
  • GENBANK/HQ699447
  • GENBANK/HQ699448
  • GENBANK/HQ699449
  • GENBANK/HQ699450
  • GENBANK/HQ699451
  • GENBANK/HQ699452
  • GENBANK/HQ699453
  • GENBANK/HQ699454
  • GENBANK/HQ699455
  • GENBANK/HQ699456
  • GENBANK/HQ699457
  • GENBANK/HQ699458
  • GENBANK/HQ699459
  • GENBANK/HQ699460