PIGR polymeric immunoglobulin receptor [Pongo abelii (Sumatran orangutan)] - Gene

Summary

Gene symbol: PIGR
Gene description: polymeric immunoglobulin receptor
Locus tag: CR201_G0022118
See related: Ensembl:ENSPPYG00000000277
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pongo abelii
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2)	1	NC_071985.2 (42574478..42592420)
RS_2023_04	previous assembly	NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1)	1	NC_071985.1 (42574443..42592385)

Chromosome 1 - NC_071985.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

PMC156606P1 (e-PCR)
- UniSTS:271408

D8S2278 (e-PCR)
- UniSTS:473906

D8S2279 (e-PCR)
- UniSTS:473907

L17709 (e-PCR)
- UniSTS:42599

RH69104 (e-PCR)
- UniSTS:5737

G15929 (e-PCR)
- UniSTS:66413

D7S3207 (e-PCR)
- UniSTS:229489

D1S1423 (e-PCR)
- UniSTS:149619

D1S1425 (e-PCR)
- UniSTS:149621

RH69956 (e-PCR)
- UniSTS:78979

PMC149362P1 (e-PCR)
- UniSTS:271034

SHGC-148408 (e-PCR)
- UniSTS:176378

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables transmembrane signaling receptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: polymeric immunoglobulin receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001131626.1 → NP_001125098.1 polymeric immunoglobulin receptor precursor

See identical proteins and their annotated locations for NP_001125098.1

Status: PROVISIONAL

Source sequence(s)

CR857992

UniProtKB/TrEMBL

Q5RA58, Q5RDC2

Related

ENSPPYP00000000294.3, ENSPPYT00000000311.3

Conserved Domains (2) summary

cd05716
Location:469 → 560

Ig_pIgR; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR)

smart00410
Location:467 → 560

IG_like; Immunoglobulin like

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Range

42574478..42592420

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_024244316.2 → XP_024100084.1 polymeric immunoglobulin receptor isoform X1

UniProtKB/TrEMBL

A0A2J8V6T8, H2N3W9, Q5RA58

Conserved Domains (1) summary

cd05716
Location:469 → 560

Ig_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar domains