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    LOC100176205 programmed cell death protein 10 [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 100176205, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC100176205
    Gene description
    programmed cell death protein 10
    See related
    Ensembl:ENSCING00000023716
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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    Genomic context

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    See LOC100176205 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current KH (GCF_000224145.3) 7 NC_020172.2 (2248865..2254431)

    Chromosome 7 - NC_020172.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100178568 Neighboring gene tyrosine-protein phosphatase non-receptor type 2-like Neighboring gene tubulin-folding cofactor E-like Neighboring gene uncharacterized LOC100186363 Neighboring gene DNA-directed RNA polymerase III subunit RPC5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_020172.2 Chromosome 7 Reference KH Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An integrated database of the ascidian, Ciona intestinalis: towards functional genomics. Satou Y, et al. Zoolog Sci, 2005 Aug. PMID 16141696
    2. A cDNA resource from the basal chordate Ciona intestinalis. Satou Y, et al. Genesis, 2002 Aug. PMID 12203911

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of MAP kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of FAR/SIN/STRIPAK complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    programmed cell death protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NC_020172.2 Reference KH Primary Assembly

      Range
      2248865..2254431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002129202.5 → XP_002129238.1  programmed cell death protein 10

      UniProtKB/TrEMBL
      A0A1W2WDB2, H2Y3T4
      Related
      ENSCINP00000036570
      Conserved Domains (1) summary
      pfam06840
      Location:15 → 164
      DUF1241; Protein of unknown function (DUF1241)
    Nucleotide Protein
    Heading Accession and Version

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